Gene : Seita.9G556100 S. italica v2.2
Defline:  (1 of 1) PTHR10416 - DNA POLYMERASE DELTA SUBUNIT 2 Genomic Order:  5561
Name:  ? Seita.9G556100 Secondary Identifier:  ? PAC:32691321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G556100 0.5kb upstream 0.5kb upstream 5172 true scaffold_9: 57236289-57241460 Setaria italica
Seita.9G556100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 57236289-57236788 Setaria italica
Seita.9G556100 0.5kb downstream 0.5kb downstream 5172 true scaffold_9: 57236789-57241960 Setaria italica
Seita.9G556100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 57241461-57241960 Setaria italica
Seita.9G556100 1.0kb upstream 1.0kb upstream 5672 true scaffold_9: 57235789-57241460 Setaria italica
Seita.9G556100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 57235789-57236788 Setaria italica
Seita.9G556100 1.0kb downstream 1.0kb downstream 5672 true scaffold_9: 57236789-57242460 Setaria italica
Seita.9G556100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 57241461-57242460 Setaria italica
Seita.9G556100 2.0kb upstream 2.0kb upstream 6672 true scaffold_9: 57234789-57241460 Setaria italica
Seita.9G556100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 57234789-57236788 Setaria italica
Seita.9G556100 2.0kb downstream 2.0kb downstream 6672 true scaffold_9: 57236789-57243460 Setaria italica
Seita.9G556100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 57241461-57243460 Setaria italica
Seita.9G556100 5.0kb upstream 5.0kb upstream 9672 true scaffold_9: 57231789-57241460 Setaria italica
Seita.9G556100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 57231789-57236788 Setaria italica
Seita.9G556100 5.0kb downstream 5.0kb downstream 9672 true scaffold_9: 57236789-57246460 Setaria italica
Seita.9G556100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 57241461-57246460 Setaria italica
Seita.9G556100 10.0kb upstream 10.0kb upstream 14672 true scaffold_9: 57226789-57241460 Setaria italica
Seita.9G556100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 57226789-57236788 Setaria italica
Seita.9G556100 10.0kb downstream 10.0kb downstream 14672 true scaffold_9: 57236789-57251460 Setaria italica
Seita.9G556100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 57241461-57251460 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189810 5267 Panicoideae View MSA
124575133 5269 Grass View MSA
122043258 5273 Angiosperm View MSA
121345903 5274 Embryophyte View MSA
123424957 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.15        
cufflinks 4.021       High
cufflinks 2.359        
cufflinks 2.025        
cufflinks 1.903       Low
cufflinks 4.27       High
cufflinks 3.036        
cufflinks 3.239        
cufflinks 2.982        
cufflinks 2.233        
cufflinks 2.81        
cufflinks 2.388        
cufflinks 2.238        
cufflinks 1.791       Low
cufflinks 2.903        
cufflinks 2.358        
cufflinks 3.357        
cufflinks 1.415       Low
cufflinks 2.028        
cufflinks 3.301        

0 Strain