Gene : Seita.9G560200 S. italica v2.2
Defline:  (1 of 1) PTHR34953:SF1 - ALPHA/BETA HYDROLASE RELATED PROTEIN Genomic Order:  5602
Name:  ? Seita.9G560200 Secondary Identifier:  ? PAC:32693502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G560200 0.5kb upstream 0.5kb upstream 2799 true scaffold_9: 57513464-57516262 Setaria italica
Seita.9G560200 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 57515763-57516262 Setaria italica
Seita.9G560200 0.5kb downstream 0.5kb downstream 2799 true scaffold_9: 57512964-57515762 Setaria italica
Seita.9G560200 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 57512964-57513463 Setaria italica
Seita.9G560200 1.0kb upstream 1.0kb upstream 3299 true scaffold_9: 57513464-57516762 Setaria italica
Seita.9G560200 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 57515763-57516762 Setaria italica
Seita.9G560200 1.0kb downstream 1.0kb downstream 3299 true scaffold_9: 57512464-57515762 Setaria italica
Seita.9G560200 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 57512464-57513463 Setaria italica
Seita.9G560200 2.0kb upstream 2.0kb upstream 4299 true scaffold_9: 57513464-57517762 Setaria italica
Seita.9G560200 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 57515763-57517762 Setaria italica
Seita.9G560200 2.0kb downstream 2.0kb downstream 4299 true scaffold_9: 57511464-57515762 Setaria italica
Seita.9G560200 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 57511464-57513463 Setaria italica
Seita.9G560200 5.0kb upstream 5.0kb upstream 7299 true scaffold_9: 57513464-57520762 Setaria italica
Seita.9G560200 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 57515763-57520762 Setaria italica
Seita.9G560200 5.0kb downstream 5.0kb downstream 7299 true scaffold_9: 57508464-57515762 Setaria italica
Seita.9G560200 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 57508464-57513463 Setaria italica
Seita.9G560200 10.0kb upstream 10.0kb upstream 12299 true scaffold_9: 57513464-57525762 Setaria italica
Seita.9G560200 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 57515763-57525762 Setaria italica
Seita.9G560200 10.0kb downstream 10.0kb downstream 12299 true scaffold_9: 57503464-57515762 Setaria italica
Seita.9G560200 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 57503464-57513463 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189384 5267 Panicoideae View MSA
124576303 5269 Grass View MSA
122043684 5273 Angiosperm View MSA
121346318 5274 Embryophyte View MSA
123380366 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.293        
cufflinks 1.495       Low
cufflinks 5.494        
cufflinks 7.138        
cufflinks 7.592        
cufflinks 1.528       Low
cufflinks 5.799        
cufflinks 3.235        
cufflinks 4.346        
cufflinks 14.519       High
cufflinks 4.735        
cufflinks 10.581       High
cufflinks 12.61       High
cufflinks 10.106       High
cufflinks 8.25        
cufflinks 2.342       Low
cufflinks 5.025        
cufflinks 4.695        
cufflinks 4.015        
cufflinks 4.3        

0 Strain