Gene : Seita.9G571900 S. italica v2.2
Defline:  (1 of 1) PTHR32258:SF3 - F11A17.4-RELATED Genomic Order:  5719
Name:  ? Seita.9G571900 Secondary Identifier:  ? PAC:32690021
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G571900 0.5kb upstream 0.5kb upstream 3049 true scaffold_9: 58322125-58325173 Setaria italica
Seita.9G571900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 58324674-58325173 Setaria italica
Seita.9G571900 0.5kb downstream 0.5kb downstream 3049 true scaffold_9: 58321625-58324673 Setaria italica
Seita.9G571900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 58321625-58322124 Setaria italica
Seita.9G571900 1.0kb upstream 1.0kb upstream 3549 true scaffold_9: 58322125-58325673 Setaria italica
Seita.9G571900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 58324674-58325673 Setaria italica
Seita.9G571900 1.0kb downstream 1.0kb downstream 3549 true scaffold_9: 58321125-58324673 Setaria italica
Seita.9G571900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 58321125-58322124 Setaria italica
Seita.9G571900 2.0kb upstream 2.0kb upstream 4549 true scaffold_9: 58322125-58326673 Setaria italica
Seita.9G571900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 58324674-58326673 Setaria italica
Seita.9G571900 2.0kb downstream 2.0kb downstream 4549 true scaffold_9: 58320125-58324673 Setaria italica
Seita.9G571900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 58320125-58322124 Setaria italica
Seita.9G571900 5.0kb upstream 5.0kb upstream 7549 true scaffold_9: 58322125-58329673 Setaria italica
Seita.9G571900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 58324674-58329673 Setaria italica
Seita.9G571900 5.0kb downstream 5.0kb downstream 7549 true scaffold_9: 58317125-58324673 Setaria italica
Seita.9G571900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 58317125-58322124 Setaria italica
Seita.9G571900 10.0kb upstream 10.0kb upstream 12549 true scaffold_9: 58322125-58334673 Setaria italica
Seita.9G571900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 58324674-58334673 Setaria italica
Seita.9G571900 10.0kb downstream 10.0kb downstream 12549 true scaffold_9: 58312125-58324673 Setaria italica
Seita.9G571900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 58312125-58322124 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176980 5267 Panicoideae View MSA
124569550 5269 Grass View MSA
122045370 5273 Angiosperm View MSA
121310443 5274 Embryophyte View MSA
123347924 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.533        
cufflinks 2.414       High
cufflinks 0.18       Low
cufflinks 0.275        
cufflinks 0.512        
cufflinks 3.135       High
cufflinks 0.99        
cufflinks 1.44        
cufflinks 0.923        
cufflinks 1.626        
cufflinks 1.03        
cufflinks 0.058     Low Low
cufflinks 0.105     Low Low
cufflinks 0.84        
cufflinks 0.144       Low
cufflinks 0.849        
cufflinks 0.243        
cufflinks 1.243        
cufflinks 0.661        
cufflinks 0.235        

0 Strain