Gene : Seita.9G573000 S. italica v2.2
Genomic Order:  5730 Name:  ? Seita.9G573000
Secondary Identifier:  ? PAC:32689662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G573000 0.5kb upstream 0.5kb upstream 2380 true scaffold_9: 58385042-58387421 Setaria italica
Seita.9G573000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 58385042-58385541 Setaria italica
Seita.9G573000 0.5kb downstream 0.5kb downstream 2380 true scaffold_9: 58385542-58387921 Setaria italica
Seita.9G573000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 58387422-58387921 Setaria italica
Seita.9G573000 1.0kb upstream 1.0kb upstream 2880 true scaffold_9: 58384542-58387421 Setaria italica
Seita.9G573000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 58384542-58385541 Setaria italica
Seita.9G573000 1.0kb downstream 1.0kb downstream 2880 true scaffold_9: 58385542-58388421 Setaria italica
Seita.9G573000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 58387422-58388421 Setaria italica
Seita.9G573000 2.0kb upstream 2.0kb upstream 3880 true scaffold_9: 58383542-58387421 Setaria italica
Seita.9G573000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 58383542-58385541 Setaria italica
Seita.9G573000 2.0kb downstream 2.0kb downstream 3880 true scaffold_9: 58385542-58389421 Setaria italica
Seita.9G573000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 58387422-58389421 Setaria italica
Seita.9G573000 5.0kb upstream 5.0kb upstream 6880 true scaffold_9: 58380542-58387421 Setaria italica
Seita.9G573000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 58380542-58385541 Setaria italica
Seita.9G573000 5.0kb downstream 5.0kb downstream 6880 true scaffold_9: 58385542-58392421 Setaria italica
Seita.9G573000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 58387422-58392421 Setaria italica
Seita.9G573000 10.0kb upstream 10.0kb upstream 11880 true scaffold_9: 58375542-58387421 Setaria italica
Seita.9G573000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 58375542-58385541 Setaria italica
Seita.9G573000 10.0kb downstream 10.0kb downstream 11880 true scaffold_9: 58385542-58397421 Setaria italica
Seita.9G573000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 58387422-58397421 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180819 5267 Panicoideae View MSA
124578490 5269 Grass View MSA
122047325 5273 Angiosperm View MSA
121347888 5274 Embryophyte View MSA
123380666 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156        
cufflinks 0.933       High
cufflinks 0.129        
cufflinks 0.182        
cufflinks 0.192        
cufflinks 0.908       High
cufflinks 0.083     Low  
cufflinks 0.047     Low  
cufflinks 0.17        
cufflinks 0.089     Low  
cufflinks 0.049     Low  
cufflinks 0.036     Low Low
cufflinks 0.07     Low  
cufflinks 0.275        
cufflinks 0.057     Low  
cufflinks 0.086     Low  
cufflinks 0.055     Low  
cufflinks 0.182        
cufflinks 0.06     Low  
cufflinks 0.009     Low Low

0 Strain