Gene : Seita.9G575500 S. italica v2.2
Defline:  (1 of 69) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  5755
Name:  ? Seita.9G575500 Secondary Identifier:  ? PAC:32686932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G575500 0.5kb upstream 0.5kb upstream 1576 true scaffold_9: 58531473-58533048 Setaria italica
Seita.9G575500 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 58532549-58533048 Setaria italica
Seita.9G575500 0.5kb downstream 0.5kb downstream 1576 true scaffold_9: 58530973-58532548 Setaria italica
Seita.9G575500 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 58530973-58531472 Setaria italica
Seita.9G575500 1.0kb upstream 1.0kb upstream 2076 true scaffold_9: 58531473-58533548 Setaria italica
Seita.9G575500 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 58532549-58533548 Setaria italica
Seita.9G575500 1.0kb downstream 1.0kb downstream 2076 true scaffold_9: 58530473-58532548 Setaria italica
Seita.9G575500 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 58530473-58531472 Setaria italica
Seita.9G575500 2.0kb upstream 2.0kb upstream 3076 true scaffold_9: 58531473-58534548 Setaria italica
Seita.9G575500 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 58532549-58534548 Setaria italica
Seita.9G575500 2.0kb downstream 2.0kb downstream 3076 true scaffold_9: 58529473-58532548 Setaria italica
Seita.9G575500 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 58529473-58531472 Setaria italica
Seita.9G575500 5.0kb upstream 5.0kb upstream 6076 true scaffold_9: 58531473-58537548 Setaria italica
Seita.9G575500 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 58532549-58537548 Setaria italica
Seita.9G575500 5.0kb downstream 5.0kb downstream 6076 true scaffold_9: 58526473-58532548 Setaria italica
Seita.9G575500 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 58526473-58531472 Setaria italica
Seita.9G575500 10.0kb upstream 10.0kb upstream 11076 true scaffold_9: 58531473-58542548 Setaria italica
Seita.9G575500 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 58532549-58542548 Setaria italica
Seita.9G575500 10.0kb downstream 10.0kb downstream 11076 true scaffold_9: 58521473-58532548 Setaria italica
Seita.9G575500 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 58521473-58531472 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994907 5273 Angiosperm View MSA
122182056 5267 Panicoideae View MSA
124586067 5269 Grass View MSA
121265116 5274 Embryophyte View MSA
123303521 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.578        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.573        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain