Gene : AT3G61950 A. thaliana TAIR10
Defline:  (1 of 3) PTHR11969//PTHR11969:SF29 - MAX DIMERIZATION, MAD // TRANSCRIPTION FACTOR BHLH57-RELATED Genomic Order:  5271
Name:  ? AT3G61950 Secondary Identifier:  ? PAC:19663214
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61950 0.5kb upstream 0.5kb upstream 2406 true Chr3: 22939046-22941451 Arabidopsis thaliana
AT3G61950 0.5kb upstream 0.5kb upstream 500 false Chr3: 22939046-22939545 Arabidopsis thaliana
AT3G61950 0.5kb downstream 0.5kb downstream 2406 true Chr3: 22939546-22941951 Arabidopsis thaliana
AT3G61950 0.5kb downstream 0.5kb downstream 500 false Chr3: 22941452-22941951 Arabidopsis thaliana
AT3G61950 1.0kb upstream 1.0kb upstream 2906 true Chr3: 22938546-22941451 Arabidopsis thaliana
AT3G61950 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22938546-22939545 Arabidopsis thaliana
AT3G61950 1.0kb downstream 1.0kb downstream 2906 true Chr3: 22939546-22942451 Arabidopsis thaliana
AT3G61950 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22941452-22942451 Arabidopsis thaliana
AT3G61950 2.0kb upstream 2.0kb upstream 3906 true Chr3: 22937546-22941451 Arabidopsis thaliana
AT3G61950 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22937546-22939545 Arabidopsis thaliana
AT3G61950 2.0kb downstream 2.0kb downstream 3906 true Chr3: 22939546-22943451 Arabidopsis thaliana
AT3G61950 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22941452-22943451 Arabidopsis thaliana
AT3G61950 5.0kb upstream 5.0kb upstream 6906 true Chr3: 22934546-22941451 Arabidopsis thaliana
AT3G61950 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22934546-22939545 Arabidopsis thaliana
AT3G61950 5.0kb downstream 5.0kb downstream 6906 true Chr3: 22939546-22946451 Arabidopsis thaliana
AT3G61950 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22941452-22946451 Arabidopsis thaliana
AT3G61950 10.0kb upstream 10.0kb upstream 11906 true Chr3: 22929546-22941451 Arabidopsis thaliana
AT3G61950 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22929546-22939545 Arabidopsis thaliana
AT3G61950 10.0kb downstream 10.0kb downstream 11906 true Chr3: 22939546-22951451 Arabidopsis thaliana
AT3G61950 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22941452-22951451 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361544 5261 Brassicaceae View MSA
123829760 5264 Brassicales-Malvales View MSA
124350390 5266 SBM View MSA
124245244 5268 Malvidae View MSA
124067472 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.233       High
cufflinks 0.129     Low  
cufflinks 0.695        
cufflinks 0.115     Low Low
cufflinks 0.276        
cufflinks 0.229     Low  

0 Strain