Gene : AT3G61990 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10509//PTHR10509:SF27 - O-METHYLTRANSFERASE-RELATED // PROTEIN COMT-1 Genomic Order:  5276
Name:  ? AT3G61990 Secondary Identifier:  ? PAC:19658500
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1121 Arabidopsis thaliana pathologic  
Athaliana PWY-361 Arabidopsis thaliana pathologic  
Athaliana PWY-6039 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61990 0.5kb upstream 0.5kb upstream 2442 true Chr3: 22957054-22959495 Arabidopsis thaliana
AT3G61990 0.5kb upstream 0.5kb upstream 500 false Chr3: 22958996-22959495 Arabidopsis thaliana
AT3G61990 0.5kb downstream 0.5kb downstream 2442 true Chr3: 22956554-22958995 Arabidopsis thaliana
AT3G61990 0.5kb downstream 0.5kb downstream 500 false Chr3: 22956554-22957053 Arabidopsis thaliana
AT3G61990 1.0kb upstream 1.0kb upstream 2942 true Chr3: 22957054-22959995 Arabidopsis thaliana
AT3G61990 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22958996-22959995 Arabidopsis thaliana
AT3G61990 1.0kb downstream 1.0kb downstream 2942 true Chr3: 22956054-22958995 Arabidopsis thaliana
AT3G61990 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22956054-22957053 Arabidopsis thaliana
AT3G61990 2.0kb upstream 2.0kb upstream 3942 true Chr3: 22957054-22960995 Arabidopsis thaliana
AT3G61990 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22958996-22960995 Arabidopsis thaliana
AT3G61990 2.0kb downstream 2.0kb downstream 3942 true Chr3: 22955054-22958995 Arabidopsis thaliana
AT3G61990 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22955054-22957053 Arabidopsis thaliana
AT3G61990 5.0kb upstream 5.0kb upstream 6942 true Chr3: 22957054-22963995 Arabidopsis thaliana
AT3G61990 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22958996-22963995 Arabidopsis thaliana
AT3G61990 5.0kb downstream 5.0kb downstream 6942 true Chr3: 22952054-22958995 Arabidopsis thaliana
AT3G61990 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22952054-22957053 Arabidopsis thaliana
AT3G61990 10.0kb upstream 10.0kb upstream 11942 true Chr3: 22957054-22968995 Arabidopsis thaliana
AT3G61990 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22958996-22968995 Arabidopsis thaliana
AT3G61990 10.0kb downstream 10.0kb downstream 11942 true Chr3: 22947054-22958995 Arabidopsis thaliana
AT3G61990 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22947054-22957053 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343385 5261 Brassicaceae View MSA
123783605 5264 Brassicales-Malvales View MSA
124281827 5266 SBM View MSA
124136513 5268 Malvidae View MSA
123864364 5270 Rosid View MSA
123449681 5271 Pentapetalae View MSA
122485211 5272 Eudicot View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.099        
cufflinks 116.99     High High
cufflinks 2.688       Low
cufflinks 107.292     High  
cufflinks 4.491        
cufflinks 67.381     High  

0 Strain