Gene : AT3G61770 A. thaliana TAIR10

Defline:  (1 of 1) PTHR31446:SF4 - ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN Genomic Order:  5248
Name:  ? AT3G61770 Secondary Identifier:  ? PAC:19659581

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61770 0.5kb upstream 0.5kb upstream 2365 true Chr3: 22864043-22866407 Arabidopsis thaliana
AT3G61770 0.5kb upstream 0.5kb upstream 500 false Chr3: 22864043-22864542 Arabidopsis thaliana
AT3G61770 0.5kb downstream 0.5kb downstream 2365 true Chr3: 22864543-22866907 Arabidopsis thaliana
AT3G61770 0.5kb downstream 0.5kb downstream 500 false Chr3: 22866408-22866907 Arabidopsis thaliana
AT3G61770 1.0kb upstream 1.0kb upstream 2865 true Chr3: 22863543-22866407 Arabidopsis thaliana
AT3G61770 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22863543-22864542 Arabidopsis thaliana
AT3G61770 1.0kb downstream 1.0kb downstream 2865 true Chr3: 22864543-22867407 Arabidopsis thaliana
AT3G61770 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22866408-22867407 Arabidopsis thaliana
AT3G61770 2.0kb upstream 2.0kb upstream 3865 true Chr3: 22862543-22866407 Arabidopsis thaliana
AT3G61770 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22862543-22864542 Arabidopsis thaliana
AT3G61770 2.0kb downstream 2.0kb downstream 3865 true Chr3: 22864543-22868407 Arabidopsis thaliana
AT3G61770 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22866408-22868407 Arabidopsis thaliana
AT3G61770 5.0kb upstream 5.0kb upstream 6865 true Chr3: 22859543-22866407 Arabidopsis thaliana
AT3G61770 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22859543-22864542 Arabidopsis thaliana
AT3G61770 5.0kb downstream 5.0kb downstream 6865 true Chr3: 22864543-22871407 Arabidopsis thaliana
AT3G61770 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22866408-22871407 Arabidopsis thaliana
AT3G61770 10.0kb upstream 10.0kb upstream 11865 true Chr3: 22854543-22866407 Arabidopsis thaliana
AT3G61770 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22854543-22864542 Arabidopsis thaliana
AT3G61770 10.0kb downstream 10.0kb downstream 11865 true Chr3: 22864543-22876407 Arabidopsis thaliana
AT3G61770 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22866408-22876407 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373476 5261 Brassicaceae View MSA
123828428 5264 Brassicales-Malvales View MSA
124343785 5266 SBM View MSA
124239062 5268 Malvidae View MSA
124066733 5270 Rosid View MSA
123749818 5271 Pentapetalae View MSA
122786289 5272 Eudicot View MSA
122043661 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121346257 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.503       High
cufflinks 4.877       Low
cufflinks 12.216       High
cufflinks 5.446        
cufflinks 8.279        
cufflinks 6.018        

0 Strain