Gene : AT3G61870 A. thaliana TAIR10
Defline:  (1 of 2) PF13301 - Protein of unknown function (DUF4079) (DUF4079) Genomic Order:  5261
Name:  ? AT3G61870 Secondary Identifier:  ? PAC:19658535
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61870 0.5kb upstream 0.5kb upstream 1933 true Chr3: 22902138-22904070 Arabidopsis thaliana
AT3G61870 0.5kb upstream 0.5kb upstream 500 false Chr3: 22902138-22902637 Arabidopsis thaliana
AT3G61870 0.5kb downstream 0.5kb downstream 1933 true Chr3: 22902638-22904570 Arabidopsis thaliana
AT3G61870 0.5kb downstream 0.5kb downstream 500 false Chr3: 22904071-22904570 Arabidopsis thaliana
AT3G61870 1.0kb upstream 1.0kb upstream 2433 true Chr3: 22901638-22904070 Arabidopsis thaliana
AT3G61870 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22901638-22902637 Arabidopsis thaliana
AT3G61870 1.0kb downstream 1.0kb downstream 2433 true Chr3: 22902638-22905070 Arabidopsis thaliana
AT3G61870 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22904071-22905070 Arabidopsis thaliana
AT3G61870 2.0kb upstream 2.0kb upstream 3433 true Chr3: 22900638-22904070 Arabidopsis thaliana
AT3G61870 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22900638-22902637 Arabidopsis thaliana
AT3G61870 2.0kb downstream 2.0kb downstream 3433 true Chr3: 22902638-22906070 Arabidopsis thaliana
AT3G61870 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22904071-22906070 Arabidopsis thaliana
AT3G61870 5.0kb upstream 5.0kb upstream 6433 true Chr3: 22897638-22904070 Arabidopsis thaliana
AT3G61870 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22897638-22902637 Arabidopsis thaliana
AT3G61870 5.0kb downstream 5.0kb downstream 6433 true Chr3: 22902638-22909070 Arabidopsis thaliana
AT3G61870 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22904071-22909070 Arabidopsis thaliana
AT3G61870 10.0kb upstream 10.0kb upstream 11433 true Chr3: 22892638-22904070 Arabidopsis thaliana
AT3G61870 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22892638-22902637 Arabidopsis thaliana
AT3G61870 10.0kb downstream 10.0kb downstream 11433 true Chr3: 22902638-22914070 Arabidopsis thaliana
AT3G61870 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22904071-22914070 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362956 5261 Brassicaceae View MSA
123828505 5264 Brassicales-Malvales View MSA
124343268 5266 SBM View MSA
124239740 5268 Malvidae View MSA
124060980 5270 Rosid View MSA
123739607 5271 Pentapetalae View MSA
122788628 5272 Eudicot View MSA
122046542 5273 Angiosperm View MSA
121345670 5274 Embryophyte View MSA
123424562 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.623     High  
cufflinks 3.159        
cufflinks 73.364     High  
cufflinks 2.466        
cufflinks 60.97     High  
cufflinks 2.112       Low

0 Strain