Gene : AT3G61610 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11122:SF10 - APOSPORY-ASSOCIATED PROTEIN C-RELATED Genomic Order:  5229
Name:  ? AT3G61610 Secondary Identifier:  ? PAC:19664017
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61610 0.5kb upstream 0.5kb upstream 2679 true Chr3: 22798527-22801205 Arabidopsis thaliana
AT3G61610 0.5kb upstream 0.5kb upstream 500 false Chr3: 22798527-22799026 Arabidopsis thaliana
AT3G61610 0.5kb downstream 0.5kb downstream 2679 true Chr3: 22799027-22801705 Arabidopsis thaliana
AT3G61610 0.5kb downstream 0.5kb downstream 500 false Chr3: 22801206-22801705 Arabidopsis thaliana
AT3G61610 1.0kb upstream 1.0kb upstream 3179 true Chr3: 22798027-22801205 Arabidopsis thaliana
AT3G61610 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22798027-22799026 Arabidopsis thaliana
AT3G61610 1.0kb downstream 1.0kb downstream 3179 true Chr3: 22799027-22802205 Arabidopsis thaliana
AT3G61610 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22801206-22802205 Arabidopsis thaliana
AT3G61610 2.0kb upstream 2.0kb upstream 4179 true Chr3: 22797027-22801205 Arabidopsis thaliana
AT3G61610 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22797027-22799026 Arabidopsis thaliana
AT3G61610 2.0kb downstream 2.0kb downstream 4179 true Chr3: 22799027-22803205 Arabidopsis thaliana
AT3G61610 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22801206-22803205 Arabidopsis thaliana
AT3G61610 5.0kb upstream 5.0kb upstream 7179 true Chr3: 22794027-22801205 Arabidopsis thaliana
AT3G61610 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22794027-22799026 Arabidopsis thaliana
AT3G61610 5.0kb downstream 5.0kb downstream 7179 true Chr3: 22799027-22806205 Arabidopsis thaliana
AT3G61610 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22801206-22806205 Arabidopsis thaliana
AT3G61610 10.0kb upstream 10.0kb upstream 12179 true Chr3: 22789027-22801205 Arabidopsis thaliana
AT3G61610 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22789027-22799026 Arabidopsis thaliana
AT3G61610 10.0kb downstream 10.0kb downstream 12179 true Chr3: 22799027-22811205 Arabidopsis thaliana
AT3G61610 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22801206-22811205 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026302 5273 Angiosperm View MSA
122367364 5261 Brassicaceae View MSA
123827908 5264 Brassicales-Malvales View MSA
124338396 5266 SBM View MSA
124242963 5268 Malvidae View MSA
124063717 5270 Rosid View MSA
123740871 5271 Pentapetalae View MSA
122785703 5272 Eudicot View MSA
121296268 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.054        
cufflinks 10.689        
cufflinks 2.129        
cufflinks 8.973        
cufflinks 1.934       Low
cufflinks 11.236       High

0 Strain