Gene : TUBG1 A. thaliana TAIR10
Primary Identifier:  ? AT3G61650 Defline:  (1 of 2) K10389 - tubulin gamma (TUBG)
Genomic Order:  5233 Name:  ? AT3G61650
Secondary Identifier:  ? PAC:19662365
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5695 Arabidopsis thaliana pathologic  
Athaliana PWY-6608 Arabidopsis thaliana pathologic  
Athaliana PWY-6609 Arabidopsis thaliana pathologic  
Athaliana PWY-7179 Arabidopsis thaliana pathologic  
Athaliana SALVADEHYPOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61650 0.5kb upstream 0.5kb upstream 2911 true Chr3: 22812601-22815511 Arabidopsis thaliana
AT3G61650 0.5kb upstream 0.5kb upstream 500 false Chr3: 22815012-22815511 Arabidopsis thaliana
AT3G61650 0.5kb downstream 0.5kb downstream 2911 true Chr3: 22812101-22815011 Arabidopsis thaliana
AT3G61650 0.5kb downstream 0.5kb downstream 500 false Chr3: 22812101-22812600 Arabidopsis thaliana
AT3G61650 1.0kb upstream 1.0kb upstream 3411 true Chr3: 22812601-22816011 Arabidopsis thaliana
AT3G61650 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22815012-22816011 Arabidopsis thaliana
AT3G61650 1.0kb downstream 1.0kb downstream 3411 true Chr3: 22811601-22815011 Arabidopsis thaliana
AT3G61650 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22811601-22812600 Arabidopsis thaliana
AT3G61650 2.0kb upstream 2.0kb upstream 4411 true Chr3: 22812601-22817011 Arabidopsis thaliana
AT3G61650 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22815012-22817011 Arabidopsis thaliana
AT3G61650 2.0kb downstream 2.0kb downstream 4411 true Chr3: 22810601-22815011 Arabidopsis thaliana
AT3G61650 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22810601-22812600 Arabidopsis thaliana
AT3G61650 5.0kb upstream 5.0kb upstream 7411 true Chr3: 22812601-22820011 Arabidopsis thaliana
AT3G61650 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22815012-22820011 Arabidopsis thaliana
AT3G61650 5.0kb downstream 5.0kb downstream 7411 true Chr3: 22807601-22815011 Arabidopsis thaliana
AT3G61650 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22807601-22812600 Arabidopsis thaliana
AT3G61650 10.0kb upstream 10.0kb upstream 12411 true Chr3: 22812601-22825011 Arabidopsis thaliana
AT3G61650 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22815012-22825011 Arabidopsis thaliana
AT3G61650 10.0kb downstream 10.0kb downstream 12411 true Chr3: 22802601-22815011 Arabidopsis thaliana
AT3G61650 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22802601-22812600 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.386        
cufflinks 11.803        
cufflinks 4.505        
cufflinks 10.717        
cufflinks 3.956       Low
cufflinks 14.25       High

0 Strain