Gene : AT3G61660 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33978:SF2 - EXPRESSED PROTEIN Genomic Order:  5234
Name:  ? AT3G61660 Secondary Identifier:  ? PAC:19662254
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61660 0.5kb upstream 0.5kb upstream 890 true Chr3: 22815652-22816541 Arabidopsis thaliana
AT3G61660 0.5kb upstream 0.5kb upstream 500 false Chr3: 22815652-22816151 Arabidopsis thaliana
AT3G61660 0.5kb downstream 0.5kb downstream 890 true Chr3: 22816152-22817041 Arabidopsis thaliana
AT3G61660 0.5kb downstream 0.5kb downstream 500 false Chr3: 22816542-22817041 Arabidopsis thaliana
AT3G61660 1.0kb upstream 1.0kb upstream 1390 true Chr3: 22815152-22816541 Arabidopsis thaliana
AT3G61660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22815152-22816151 Arabidopsis thaliana
AT3G61660 1.0kb downstream 1.0kb downstream 1390 true Chr3: 22816152-22817541 Arabidopsis thaliana
AT3G61660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22816542-22817541 Arabidopsis thaliana
AT3G61660 2.0kb upstream 2.0kb upstream 2390 true Chr3: 22814152-22816541 Arabidopsis thaliana
AT3G61660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22814152-22816151 Arabidopsis thaliana
AT3G61660 2.0kb downstream 2.0kb downstream 2390 true Chr3: 22816152-22818541 Arabidopsis thaliana
AT3G61660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22816542-22818541 Arabidopsis thaliana
AT3G61660 5.0kb upstream 5.0kb upstream 5390 true Chr3: 22811152-22816541 Arabidopsis thaliana
AT3G61660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22811152-22816151 Arabidopsis thaliana
AT3G61660 5.0kb downstream 5.0kb downstream 5390 true Chr3: 22816152-22821541 Arabidopsis thaliana
AT3G61660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22816542-22821541 Arabidopsis thaliana
AT3G61660 10.0kb upstream 10.0kb upstream 10390 true Chr3: 22806152-22816541 Arabidopsis thaliana
AT3G61660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22806152-22816151 Arabidopsis thaliana
AT3G61660 10.0kb downstream 10.0kb downstream 10390 true Chr3: 22816152-22826541 Arabidopsis thaliana
AT3G61660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22816542-22826541 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122372050 5261 Brassicaceae View MSA
123838413 5264 Brassicales-Malvales View MSA
124322448 5266 SBM View MSA
124238415 5268 Malvidae View MSA
124073990 5270 Rosid View MSA
123746126 5271 Pentapetalae View MSA
122796980 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.253     Low  
cufflinks 0.582        
cufflinks 0.256     Low  
cufflinks 0.499        
cufflinks 0.041     Low Low
cufflinks 1.217       High

0 Strain