Gene : CYSC1 A. thaliana TAIR10
Primary Identifier:  ? AT3G61440 Defline:  (1 of 1) K13034 - L-3-cyanoalanine synthase/ cysteine synthase (ATCYSC1)
Genomic Order:  5211 Name:  ? AT3G61440
Secondary Identifier:  ? PAC:19659572
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ASPSYNII-PWY Arabidopsis thaliana pathologic  
Athaliana CYSTSYN-PWY Arabidopsis thaliana pathologic  
Athaliana P401-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6936 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61440 0.5kb upstream 0.5kb upstream 2964 true Chr3: 22735163-22738126 Arabidopsis thaliana
AT3G61440 0.5kb upstream 0.5kb upstream 500 false Chr3: 22735163-22735662 Arabidopsis thaliana
AT3G61440 0.5kb downstream 0.5kb downstream 2964 true Chr3: 22735663-22738626 Arabidopsis thaliana
AT3G61440 0.5kb downstream 0.5kb downstream 500 false Chr3: 22738127-22738626 Arabidopsis thaliana
AT3G61440 1.0kb upstream 1.0kb upstream 3464 true Chr3: 22734663-22738126 Arabidopsis thaliana
AT3G61440 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22734663-22735662 Arabidopsis thaliana
AT3G61440 1.0kb downstream 1.0kb downstream 3464 true Chr3: 22735663-22739126 Arabidopsis thaliana
AT3G61440 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22738127-22739126 Arabidopsis thaliana
AT3G61440 2.0kb upstream 2.0kb upstream 4464 true Chr3: 22733663-22738126 Arabidopsis thaliana
AT3G61440 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22733663-22735662 Arabidopsis thaliana
AT3G61440 2.0kb downstream 2.0kb downstream 4464 true Chr3: 22735663-22740126 Arabidopsis thaliana
AT3G61440 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22738127-22740126 Arabidopsis thaliana
AT3G61440 5.0kb upstream 5.0kb upstream 7464 true Chr3: 22730663-22738126 Arabidopsis thaliana
AT3G61440 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22730663-22735662 Arabidopsis thaliana
AT3G61440 5.0kb downstream 5.0kb downstream 7464 true Chr3: 22735663-22743126 Arabidopsis thaliana
AT3G61440 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22738127-22743126 Arabidopsis thaliana
AT3G61440 10.0kb upstream 10.0kb upstream 12464 true Chr3: 22725663-22738126 Arabidopsis thaliana
AT3G61440 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22725663-22735662 Arabidopsis thaliana
AT3G61440 10.0kb downstream 10.0kb downstream 12464 true Chr3: 22735663-22748126 Arabidopsis thaliana
AT3G61440 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22738127-22748126 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040912 5273 Angiosperm View MSA
122366950 5261 Brassicaceae View MSA
123828686 5264 Brassicales-Malvales View MSA
124338600 5266 SBM View MSA
124244818 5268 Malvidae View MSA
124062527 5270 Rosid View MSA
123753614 5271 Pentapetalae View MSA
122790357 5272 Eudicot View MSA
121309765 5274 Embryophyte View MSA
123347430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.067     High  
cufflinks 54.944     High  
cufflinks 58.701     High  
cufflinks 66.36     High  
cufflinks 69.209     High High
cufflinks 40.776     High Low

0 Strain