Gene : PIP1A A. thaliana TAIR10
Primary Identifier:  ? AT3G61430 Defline:  (1 of 4) PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED
Genomic Order:  5210 Name:  ? AT3G61430
Secondary Identifier:  ? PAC:19663046
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Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61430 0.5kb upstream 0.5kb upstream 2527 true Chr3: 22732809-22735335 Arabidopsis thaliana
AT3G61430 0.5kb upstream 0.5kb upstream 500 false Chr3: 22732809-22733308 Arabidopsis thaliana
AT3G61430 0.5kb downstream 0.5kb downstream 2527 true Chr3: 22733309-22735835 Arabidopsis thaliana
AT3G61430 0.5kb downstream 0.5kb downstream 500 false Chr3: 22735336-22735835 Arabidopsis thaliana
AT3G61430 1.0kb upstream 1.0kb upstream 3027 true Chr3: 22732309-22735335 Arabidopsis thaliana
AT3G61430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22732309-22733308 Arabidopsis thaliana
AT3G61430 1.0kb downstream 1.0kb downstream 3027 true Chr3: 22733309-22736335 Arabidopsis thaliana
AT3G61430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22735336-22736335 Arabidopsis thaliana
AT3G61430 2.0kb upstream 2.0kb upstream 4027 true Chr3: 22731309-22735335 Arabidopsis thaliana
AT3G61430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22731309-22733308 Arabidopsis thaliana
AT3G61430 2.0kb downstream 2.0kb downstream 4027 true Chr3: 22733309-22737335 Arabidopsis thaliana
AT3G61430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22735336-22737335 Arabidopsis thaliana
AT3G61430 5.0kb upstream 5.0kb upstream 7027 true Chr3: 22728309-22735335 Arabidopsis thaliana
AT3G61430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22728309-22733308 Arabidopsis thaliana
AT3G61430 5.0kb downstream 5.0kb downstream 7027 true Chr3: 22733309-22740335 Arabidopsis thaliana
AT3G61430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22735336-22740335 Arabidopsis thaliana
AT3G61430 10.0kb upstream 10.0kb upstream 12027 true Chr3: 22723309-22735335 Arabidopsis thaliana
AT3G61430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22723309-22733308 Arabidopsis thaliana
AT3G61430 10.0kb downstream 10.0kb downstream 12027 true Chr3: 22733309-22745335 Arabidopsis thaliana
AT3G61430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22735336-22745335 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366162 5261 Brassicaceae View MSA
123838130 5264 Brassicales-Malvales View MSA
124349597 5266 SBM View MSA
124250285 5268 Malvidae View MSA
124069704 5270 Rosid View MSA
123745949 5271 Pentapetalae View MSA
122797491 5272 Eudicot View MSA
122048172 5273 Angiosperm View MSA
121347891 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.481        
cufflinks 33.198     High  
cufflinks 22.32       Low
cufflinks 48.056     High High
cufflinks 34.997     High  
cufflinks 41.889     High  

0 Strain