Gene : SYP73 A. thaliana TAIR10
Primary Identifier:  ? AT3G61450 Defline:  (1 of 3) K08506 - syntaxin of plants SYP7 (SYP7)
Genomic Order:  5212 Name:  ? AT3G61450
Secondary Identifier:  ? PAC:19664566
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61450 0.5kb upstream 0.5kb upstream 2244 true Chr3: 22737853-22740096 Arabidopsis thaliana
AT3G61450 0.5kb upstream 0.5kb upstream 500 false Chr3: 22737853-22738352 Arabidopsis thaliana
AT3G61450 0.5kb downstream 0.5kb downstream 2244 true Chr3: 22738353-22740596 Arabidopsis thaliana
AT3G61450 0.5kb downstream 0.5kb downstream 500 false Chr3: 22740097-22740596 Arabidopsis thaliana
AT3G61450 1.0kb upstream 1.0kb upstream 2744 true Chr3: 22737353-22740096 Arabidopsis thaliana
AT3G61450 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22737353-22738352 Arabidopsis thaliana
AT3G61450 1.0kb downstream 1.0kb downstream 2744 true Chr3: 22738353-22741096 Arabidopsis thaliana
AT3G61450 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22740097-22741096 Arabidopsis thaliana
AT3G61450 2.0kb upstream 2.0kb upstream 3744 true Chr3: 22736353-22740096 Arabidopsis thaliana
AT3G61450 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22736353-22738352 Arabidopsis thaliana
AT3G61450 2.0kb downstream 2.0kb downstream 3744 true Chr3: 22738353-22742096 Arabidopsis thaliana
AT3G61450 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22740097-22742096 Arabidopsis thaliana
AT3G61450 5.0kb upstream 5.0kb upstream 6744 true Chr3: 22733353-22740096 Arabidopsis thaliana
AT3G61450 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22733353-22738352 Arabidopsis thaliana
AT3G61450 5.0kb downstream 5.0kb downstream 6744 true Chr3: 22738353-22745096 Arabidopsis thaliana
AT3G61450 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22740097-22745096 Arabidopsis thaliana
AT3G61450 10.0kb upstream 10.0kb upstream 11744 true Chr3: 22728353-22740096 Arabidopsis thaliana
AT3G61450 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22728353-22738352 Arabidopsis thaliana
AT3G61450 10.0kb downstream 10.0kb downstream 11744 true Chr3: 22738353-22750096 Arabidopsis thaliana
AT3G61450 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22740097-22750096 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510213 5273 Angiosperm View MSA
122360656 5261 Brassicaceae View MSA
123797998 5264 Brassicales-Malvales View MSA
124295688 5266 SBM View MSA
124148060 5268 Malvidae View MSA
123874138 5270 Rosid View MSA
123458154 5271 Pentapetalae View MSA
122493564 5272 Eudicot View MSA
120783322 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105     Low  
cufflinks 0.518        
cufflinks 0.118     Low  
cufflinks 0.626       High
cufflinks 0.098     Low  
cufflinks 0.331     Low  

0 Strain