Gene : AT3G61380 A. thaliana TAIR10
Defline:  (1 of 4) PTHR21726//PTHR21726:SF30 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED // PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  5203
Name:  ? AT3G61380 Secondary Identifier:  ? PAC:19660145
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61380 0.5kb upstream 0.5kb upstream 3298 true Chr3: 22708482-22711779 Arabidopsis thaliana
AT3G61380 0.5kb upstream 0.5kb upstream 500 false Chr3: 22711280-22711779 Arabidopsis thaliana
AT3G61380 0.5kb downstream 0.5kb downstream 3298 true Chr3: 22707982-22711279 Arabidopsis thaliana
AT3G61380 0.5kb downstream 0.5kb downstream 500 false Chr3: 22707982-22708481 Arabidopsis thaliana
AT3G61380 1.0kb upstream 1.0kb upstream 3798 true Chr3: 22708482-22712279 Arabidopsis thaliana
AT3G61380 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22711280-22712279 Arabidopsis thaliana
AT3G61380 1.0kb downstream 1.0kb downstream 3798 true Chr3: 22707482-22711279 Arabidopsis thaliana
AT3G61380 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22707482-22708481 Arabidopsis thaliana
AT3G61380 2.0kb upstream 2.0kb upstream 4798 true Chr3: 22708482-22713279 Arabidopsis thaliana
AT3G61380 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22711280-22713279 Arabidopsis thaliana
AT3G61380 2.0kb downstream 2.0kb downstream 4798 true Chr3: 22706482-22711279 Arabidopsis thaliana
AT3G61380 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22706482-22708481 Arabidopsis thaliana
AT3G61380 5.0kb upstream 5.0kb upstream 7798 true Chr3: 22708482-22716279 Arabidopsis thaliana
AT3G61380 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22711280-22716279 Arabidopsis thaliana
AT3G61380 5.0kb downstream 5.0kb downstream 7798 true Chr3: 22703482-22711279 Arabidopsis thaliana
AT3G61380 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22703482-22708481 Arabidopsis thaliana
AT3G61380 10.0kb upstream 10.0kb upstream 12798 true Chr3: 22708482-22721279 Arabidopsis thaliana
AT3G61380 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22711280-22721279 Arabidopsis thaliana
AT3G61380 10.0kb downstream 10.0kb downstream 12798 true Chr3: 22698482-22711279 Arabidopsis thaliana
AT3G61380 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22698482-22708481 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378819 5261 Brassicaceae View MSA
123802003 5264 Brassicales-Malvales View MSA
124299234 5266 SBM View MSA
124150703 5268 Malvidae View MSA
123876271 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.034        
cufflinks 35.893     High  
cufflinks 3.909        
cufflinks 32.002     High  
cufflinks 2.306       Low
cufflinks 41.409     High  

0 Strain