Gene : SK21 A. thaliana TAIR10
Primary Identifier:  ? AT3G61415 Defline:  (1 of 2) PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED
Genomic Order:  5208 Name:  ? AT3G61415
Secondary Identifier:  ? PAC:19661315
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61415 0.5kb upstream 0.5kb upstream 4215 true Chr3: 22722710-22726924 Arabidopsis thaliana
AT3G61415 0.5kb upstream 0.5kb upstream 500 false Chr3: 22726425-22726924 Arabidopsis thaliana
AT3G61415 0.5kb downstream 0.5kb downstream 4215 true Chr3: 22722210-22726424 Arabidopsis thaliana
AT3G61415 0.5kb downstream 0.5kb downstream 500 false Chr3: 22722210-22722709 Arabidopsis thaliana
AT3G61415 1.0kb upstream 1.0kb upstream 4715 true Chr3: 22722710-22727424 Arabidopsis thaliana
AT3G61415 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22726425-22727424 Arabidopsis thaliana
AT3G61415 1.0kb downstream 1.0kb downstream 4715 true Chr3: 22721710-22726424 Arabidopsis thaliana
AT3G61415 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22721710-22722709 Arabidopsis thaliana
AT3G61415 2.0kb upstream 2.0kb upstream 5715 true Chr3: 22722710-22728424 Arabidopsis thaliana
AT3G61415 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22726425-22728424 Arabidopsis thaliana
AT3G61415 2.0kb downstream 2.0kb downstream 5715 true Chr3: 22720710-22726424 Arabidopsis thaliana
AT3G61415 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22720710-22722709 Arabidopsis thaliana
AT3G61415 5.0kb upstream 5.0kb upstream 8715 true Chr3: 22722710-22731424 Arabidopsis thaliana
AT3G61415 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22726425-22731424 Arabidopsis thaliana
AT3G61415 5.0kb downstream 5.0kb downstream 8715 true Chr3: 22717710-22726424 Arabidopsis thaliana
AT3G61415 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22717710-22722709 Arabidopsis thaliana
AT3G61415 10.0kb upstream 10.0kb upstream 13715 true Chr3: 22722710-22736424 Arabidopsis thaliana
AT3G61415 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22726425-22736424 Arabidopsis thaliana
AT3G61415 10.0kb downstream 10.0kb downstream 13715 true Chr3: 22712710-22726424 Arabidopsis thaliana
AT3G61415 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22712710-22722709 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122360699 5261 Brassicaceae View MSA
123828719 5264 Brassicales-Malvales View MSA
124351073 5266 SBM View MSA
124247968 5268 Malvidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.895        
cufflinks 2.053        
cufflinks 1.842        
cufflinks 2.284       High
cufflinks 1.661       Low
cufflinks 1.99        

0 Strain