Gene : LCR52 A. thaliana TAIR10
Primary Identifier:  ? AT3G61175 Defline:  (1 of 13) PTHR33830//PTHR33830:SF3 - FAMILY NOT NAMED // DEFENSIN-LIKE PROTEIN 122-RELATED
Genomic Order:  5181 Name:  ? AT3G61175
Secondary Identifier:  ? PAC:19661076
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61175 0.5kb upstream 0.5kb upstream 827 true Chr3: 22642983-22643809 Arabidopsis thaliana
AT3G61175 0.5kb upstream 0.5kb upstream 500 false Chr3: 22643310-22643809 Arabidopsis thaliana
AT3G61175 0.5kb downstream 0.5kb downstream 827 true Chr3: 22642483-22643309 Arabidopsis thaliana
AT3G61175 0.5kb downstream 0.5kb downstream 500 false Chr3: 22642483-22642982 Arabidopsis thaliana
AT3G61175 1.0kb upstream 1.0kb upstream 1327 true Chr3: 22642983-22644309 Arabidopsis thaliana
AT3G61175 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22643310-22644309 Arabidopsis thaliana
AT3G61175 1.0kb downstream 1.0kb downstream 1327 true Chr3: 22641983-22643309 Arabidopsis thaliana
AT3G61175 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22641983-22642982 Arabidopsis thaliana
AT3G61175 2.0kb upstream 2.0kb upstream 2327 true Chr3: 22642983-22645309 Arabidopsis thaliana
AT3G61175 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22643310-22645309 Arabidopsis thaliana
AT3G61175 2.0kb downstream 2.0kb downstream 2327 true Chr3: 22640983-22643309 Arabidopsis thaliana
AT3G61175 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22640983-22642982 Arabidopsis thaliana
AT3G61175 5.0kb upstream 5.0kb upstream 5327 true Chr3: 22642983-22648309 Arabidopsis thaliana
AT3G61175 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22643310-22648309 Arabidopsis thaliana
AT3G61175 5.0kb downstream 5.0kb downstream 5327 true Chr3: 22637983-22643309 Arabidopsis thaliana
AT3G61175 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22637983-22642982 Arabidopsis thaliana
AT3G61175 10.0kb upstream 10.0kb upstream 10327 true Chr3: 22642983-22653309 Arabidopsis thaliana
AT3G61175 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22643310-22653309 Arabidopsis thaliana
AT3G61175 10.0kb downstream 10.0kb downstream 10327 true Chr3: 22632983-22643309 Arabidopsis thaliana
AT3G61175 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22632983-22642982 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494297 5273 Angiosperm Singleton cluster - no MSA
122329920 5261 Brassicaceae Singleton cluster - no MSA
123771199 5264 Brassicales-Malvales Singleton cluster - no MSA
124269731 5266 SBM Singleton cluster - no MSA
124125854 5268 Malvidae Singleton cluster - no MSA
123854802 5270 Rosid Singleton cluster - no MSA
123440806 5271 Pentapetalae Singleton cluster - no MSA
122476391 5272 Eudicot Singleton cluster - no MSA
120767666 5274 Embryophyte Singleton cluster - no MSA
122810058 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain