Gene : LCR53 A. thaliana TAIR10
Primary Identifier:  ? AT3G61177 Defline:  (1 of 13) PTHR33830//PTHR33830:SF3 - FAMILY NOT NAMED // DEFENSIN-LIKE PROTEIN 122-RELATED
Genomic Order:  5182 Name:  ? AT3G61177
Secondary Identifier:  ? PAC:19662999
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61177 0.5kb upstream 0.5kb upstream 822 true Chr3: 22644470-22645291 Arabidopsis thaliana
AT3G61177 0.5kb upstream 0.5kb upstream 500 false Chr3: 22644792-22645291 Arabidopsis thaliana
AT3G61177 0.5kb downstream 0.5kb downstream 822 true Chr3: 22643970-22644791 Arabidopsis thaliana
AT3G61177 0.5kb downstream 0.5kb downstream 500 false Chr3: 22643970-22644469 Arabidopsis thaliana
AT3G61177 1.0kb upstream 1.0kb upstream 1322 true Chr3: 22644470-22645791 Arabidopsis thaliana
AT3G61177 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22644792-22645791 Arabidopsis thaliana
AT3G61177 1.0kb downstream 1.0kb downstream 1322 true Chr3: 22643470-22644791 Arabidopsis thaliana
AT3G61177 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22643470-22644469 Arabidopsis thaliana
AT3G61177 2.0kb upstream 2.0kb upstream 2322 true Chr3: 22644470-22646791 Arabidopsis thaliana
AT3G61177 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22644792-22646791 Arabidopsis thaliana
AT3G61177 2.0kb downstream 2.0kb downstream 2322 true Chr3: 22642470-22644791 Arabidopsis thaliana
AT3G61177 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22642470-22644469 Arabidopsis thaliana
AT3G61177 5.0kb upstream 5.0kb upstream 5322 true Chr3: 22644470-22649791 Arabidopsis thaliana
AT3G61177 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22644792-22649791 Arabidopsis thaliana
AT3G61177 5.0kb downstream 5.0kb downstream 5322 true Chr3: 22639470-22644791 Arabidopsis thaliana
AT3G61177 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22639470-22644469 Arabidopsis thaliana
AT3G61177 10.0kb upstream 10.0kb upstream 10322 true Chr3: 22644470-22654791 Arabidopsis thaliana
AT3G61177 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22644792-22654791 Arabidopsis thaliana
AT3G61177 10.0kb downstream 10.0kb downstream 10322 true Chr3: 22634470-22644791 Arabidopsis thaliana
AT3G61177 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22634470-22644469 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122370998 5261 Brassicaceae View MSA
123841000 5264 Brassicales-Malvales View MSA
124322820 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain