Gene : AT3G60970 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24223//PTHR24223:SF165 - FAMILY NOT NAMED // ABC TRANSPORTER C FAMILY MEMBER 15-RELATED Genomic Order:  5156
Name:  ? AT3G60970 Secondary Identifier:  ? PAC:19660402
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60970 0.5kb upstream 0.5kb upstream 4682 true Chr3: 22557035-22561716 Arabidopsis thaliana
AT3G60970 0.5kb upstream 0.5kb upstream 500 false Chr3: 22557035-22557534 Arabidopsis thaliana
AT3G60970 0.5kb downstream 0.5kb downstream 4682 true Chr3: 22557535-22562216 Arabidopsis thaliana
AT3G60970 0.5kb downstream 0.5kb downstream 500 false Chr3: 22561717-22562216 Arabidopsis thaliana
AT3G60970 1.0kb upstream 1.0kb upstream 5182 true Chr3: 22556535-22561716 Arabidopsis thaliana
AT3G60970 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22556535-22557534 Arabidopsis thaliana
AT3G60970 1.0kb downstream 1.0kb downstream 5182 true Chr3: 22557535-22562716 Arabidopsis thaliana
AT3G60970 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22561717-22562716 Arabidopsis thaliana
AT3G60970 2.0kb upstream 2.0kb upstream 6182 true Chr3: 22555535-22561716 Arabidopsis thaliana
AT3G60970 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22555535-22557534 Arabidopsis thaliana
AT3G60970 2.0kb downstream 2.0kb downstream 6182 true Chr3: 22557535-22563716 Arabidopsis thaliana
AT3G60970 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22561717-22563716 Arabidopsis thaliana
AT3G60970 5.0kb upstream 5.0kb upstream 9182 true Chr3: 22552535-22561716 Arabidopsis thaliana
AT3G60970 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22552535-22557534 Arabidopsis thaliana
AT3G60970 5.0kb downstream 5.0kb downstream 9182 true Chr3: 22557535-22566716 Arabidopsis thaliana
AT3G60970 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22561717-22566716 Arabidopsis thaliana
AT3G60970 10.0kb upstream 10.0kb upstream 14182 true Chr3: 22547535-22561716 Arabidopsis thaliana
AT3G60970 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22547535-22557534 Arabidopsis thaliana
AT3G60970 10.0kb downstream 10.0kb downstream 14182 true Chr3: 22557535-22571716 Arabidopsis thaliana
AT3G60970 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22561717-22571716 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329860 5261 Brassicaceae Singleton cluster - no MSA
123841868 5264 Brassicales-Malvales View MSA
124323084 5266 SBM View MSA
124255405 5268 Malvidae View MSA
124074189 5270 Rosid View MSA
123753057 5271 Pentapetalae View MSA
122797435 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.66       High
cufflinks 0.062     Low  
cufflinks 0.055     Low  
cufflinks 0.137     Low  
cufflinks 0.167     Low  
cufflinks 0.03     Low Low

0 Strain