Gene : AT3G60920 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13743:SF16 - PROTEIN T01H10.8 Genomic Order:  5150
Name:  ? AT3G60920 Secondary Identifier:  ? PAC:19658512
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60920 0.5kb upstream 0.5kb upstream 10204 true Chr3: 22503328-22513531 Arabidopsis thaliana
AT3G60920 0.5kb upstream 0.5kb upstream 500 false Chr3: 22513032-22513531 Arabidopsis thaliana
AT3G60920 0.5kb downstream 0.5kb downstream 10204 true Chr3: 22502828-22513031 Arabidopsis thaliana
AT3G60920 0.5kb downstream 0.5kb downstream 500 false Chr3: 22502828-22503327 Arabidopsis thaliana
AT3G60920 1.0kb upstream 1.0kb upstream 10704 true Chr3: 22503328-22514031 Arabidopsis thaliana
AT3G60920 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22513032-22514031 Arabidopsis thaliana
AT3G60920 1.0kb downstream 1.0kb downstream 10704 true Chr3: 22502328-22513031 Arabidopsis thaliana
AT3G60920 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22502328-22503327 Arabidopsis thaliana
AT3G60920 2.0kb upstream 2.0kb upstream 11704 true Chr3: 22503328-22515031 Arabidopsis thaliana
AT3G60920 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22513032-22515031 Arabidopsis thaliana
AT3G60920 2.0kb downstream 2.0kb downstream 11704 true Chr3: 22501328-22513031 Arabidopsis thaliana
AT3G60920 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22501328-22503327 Arabidopsis thaliana
AT3G60920 5.0kb upstream 5.0kb upstream 14704 true Chr3: 22503328-22518031 Arabidopsis thaliana
AT3G60920 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22513032-22518031 Arabidopsis thaliana
AT3G60920 5.0kb downstream 5.0kb downstream 14704 true Chr3: 22498328-22513031 Arabidopsis thaliana
AT3G60920 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22498328-22503327 Arabidopsis thaliana
AT3G60920 10.0kb upstream 10.0kb upstream 19704 true Chr3: 22503328-22523031 Arabidopsis thaliana
AT3G60920 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22513032-22523031 Arabidopsis thaliana
AT3G60920 10.0kb downstream 10.0kb downstream 19704 true Chr3: 22493328-22513031 Arabidopsis thaliana
AT3G60920 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22493328-22503327 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329671 5261 Brassicaceae Singleton cluster - no MSA
123770965 5264 Brassicales-Malvales Singleton cluster - no MSA
124269499 5266 SBM Singleton cluster - no MSA
124125634 5268 Malvidae Singleton cluster - no MSA
123854595 5270 Rosid Singleton cluster - no MSA
123440609 5271 Pentapetalae Singleton cluster - no MSA
122476194 5272 Eudicot Singleton cluster - no MSA
122051109 5273 Angiosperm View MSA
121349597 5274 Embryophyte View MSA
123381372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low  
cufflinks 0.003     Low  
cufflinks 0.02     Low High
cufflinks 0.002     Low  
cufflinks 0.023     Low High
cufflinks 0.002     Low  

0 Strain