Gene : AT3G60660 A. thaliana TAIR10
Defline:  (1 of 1) KOG4832 - Uncharacterized conserved protein Genomic Order:  5123
Name:  ? AT3G60660 Secondary Identifier:  ? PAC:19662883
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60660 0.5kb upstream 0.5kb upstream 2568 true Chr3: 22420910-22423477 Arabidopsis thaliana
AT3G60660 0.5kb upstream 0.5kb upstream 500 false Chr3: 22420910-22421409 Arabidopsis thaliana
AT3G60660 0.5kb downstream 0.5kb downstream 2568 true Chr3: 22421410-22423977 Arabidopsis thaliana
AT3G60660 0.5kb downstream 0.5kb downstream 500 false Chr3: 22423478-22423977 Arabidopsis thaliana
AT3G60660 1.0kb upstream 1.0kb upstream 3068 true Chr3: 22420410-22423477 Arabidopsis thaliana
AT3G60660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22420410-22421409 Arabidopsis thaliana
AT3G60660 1.0kb downstream 1.0kb downstream 3068 true Chr3: 22421410-22424477 Arabidopsis thaliana
AT3G60660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22423478-22424477 Arabidopsis thaliana
AT3G60660 2.0kb upstream 2.0kb upstream 4068 true Chr3: 22419410-22423477 Arabidopsis thaliana
AT3G60660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22419410-22421409 Arabidopsis thaliana
AT3G60660 2.0kb downstream 2.0kb downstream 4068 true Chr3: 22421410-22425477 Arabidopsis thaliana
AT3G60660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22423478-22425477 Arabidopsis thaliana
AT3G60660 5.0kb upstream 5.0kb upstream 7068 true Chr3: 22416410-22423477 Arabidopsis thaliana
AT3G60660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22416410-22421409 Arabidopsis thaliana
AT3G60660 5.0kb downstream 5.0kb downstream 7068 true Chr3: 22421410-22428477 Arabidopsis thaliana
AT3G60660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22423478-22428477 Arabidopsis thaliana
AT3G60660 10.0kb upstream 10.0kb upstream 12068 true Chr3: 22411410-22423477 Arabidopsis thaliana
AT3G60660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22411410-22421409 Arabidopsis thaliana
AT3G60660 10.0kb downstream 10.0kb downstream 12068 true Chr3: 22421410-22433477 Arabidopsis thaliana
AT3G60660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22423478-22433477 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373494 5261 Brassicaceae View MSA
123841691 5264 Brassicales-Malvales View MSA
124341402 5266 SBM View MSA
124239118 5268 Malvidae View MSA
124068323 5270 Rosid View MSA
123737172 5271 Pentapetalae View MSA
122791844 5272 Eudicot View MSA
122043694 5273 Angiosperm View MSA
121346500 5274 Embryophyte View MSA
123426002 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.927        
cufflinks 3.88        
cufflinks 0.782       Low
cufflinks 3.471        
cufflinks 0.933        
cufflinks 3.812        

0 Strain