Gene : AT3G60690 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31374//PTHR31374:SF56 - FAMILY NOT NAMED // AUXIN-REGULATED PROTEIN-RELATED Genomic Order:  5126
Name:  ? AT3G60690 Secondary Identifier:  ? PAC:19663069
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60690 0.5kb upstream 0.5kb upstream 1329 true Chr3: 22434621-22435949 Arabidopsis thaliana
AT3G60690 0.5kb upstream 0.5kb upstream 500 false Chr3: 22434621-22435120 Arabidopsis thaliana
AT3G60690 0.5kb downstream 0.5kb downstream 1329 true Chr3: 22435121-22436449 Arabidopsis thaliana
AT3G60690 0.5kb downstream 0.5kb downstream 500 false Chr3: 22435950-22436449 Arabidopsis thaliana
AT3G60690 1.0kb upstream 1.0kb upstream 1829 true Chr3: 22434121-22435949 Arabidopsis thaliana
AT3G60690 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22434121-22435120 Arabidopsis thaliana
AT3G60690 1.0kb downstream 1.0kb downstream 1829 true Chr3: 22435121-22436949 Arabidopsis thaliana
AT3G60690 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22435950-22436949 Arabidopsis thaliana
AT3G60690 2.0kb upstream 2.0kb upstream 2829 true Chr3: 22433121-22435949 Arabidopsis thaliana
AT3G60690 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22433121-22435120 Arabidopsis thaliana
AT3G60690 2.0kb downstream 2.0kb downstream 2829 true Chr3: 22435121-22437949 Arabidopsis thaliana
AT3G60690 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22435950-22437949 Arabidopsis thaliana
AT3G60690 5.0kb upstream 5.0kb upstream 5829 true Chr3: 22430121-22435949 Arabidopsis thaliana
AT3G60690 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22430121-22435120 Arabidopsis thaliana
AT3G60690 5.0kb downstream 5.0kb downstream 5829 true Chr3: 22435121-22440949 Arabidopsis thaliana
AT3G60690 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22435950-22440949 Arabidopsis thaliana
AT3G60690 10.0kb upstream 10.0kb upstream 10829 true Chr3: 22425121-22435949 Arabidopsis thaliana
AT3G60690 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22425121-22435120 Arabidopsis thaliana
AT3G60690 10.0kb downstream 10.0kb downstream 10829 true Chr3: 22435121-22445949 Arabidopsis thaliana
AT3G60690 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22435950-22445949 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373544 5261 Brassicaceae View MSA
123839865 5264 Brassicales-Malvales View MSA
124344146 5266 SBM View MSA
124254272 5268 Malvidae View MSA
124066518 5270 Rosid View MSA
123741344 5271 Pentapetalae View MSA
122791593 5272 Eudicot View MSA
122049926 5273 Angiosperm View MSA
121311651 5274 Embryophyte View MSA
123348921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.664     High High
cufflinks 13.379        
cufflinks 10.28       Low
cufflinks 17.174        
cufflinks 16.283        
cufflinks 21.367        

0 Strain