Gene : HAM3 A. thaliana TAIR10
Primary Identifier:  ? AT4G00150 Defline:  (1 of 3) PTHR31636//PTHR31636:SF11 - FAMILY NOT NAMED // SCARECROW-LIKE PROTEIN 22-RELATED
Genomic Order:  17 Name:  ? AT4G00150
Secondary Identifier:  ? PAC:19646620
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00150 0.5kb upstream 0.5kb upstream 2588 true Chr4: 57199-59786 Arabidopsis thaliana
AT4G00150 0.5kb upstream 0.5kb upstream 500 false Chr4: 59287-59786 Arabidopsis thaliana
AT4G00150 0.5kb downstream 0.5kb downstream 2588 true Chr4: 56699-59286 Arabidopsis thaliana
AT4G00150 0.5kb downstream 0.5kb downstream 500 false Chr4: 56699-57198 Arabidopsis thaliana
AT4G00150 1.0kb upstream 1.0kb upstream 3088 true Chr4: 57199-60286 Arabidopsis thaliana
AT4G00150 1.0kb upstream 1.0kb upstream 1000 false Chr4: 59287-60286 Arabidopsis thaliana
AT4G00150 1.0kb downstream 1.0kb downstream 3088 true Chr4: 56199-59286 Arabidopsis thaliana
AT4G00150 1.0kb downstream 1.0kb downstream 1000 false Chr4: 56199-57198 Arabidopsis thaliana
AT4G00150 2.0kb upstream 2.0kb upstream 4088 true Chr4: 57199-61286 Arabidopsis thaliana
AT4G00150 2.0kb upstream 2.0kb upstream 2000 false Chr4: 59287-61286 Arabidopsis thaliana
AT4G00150 2.0kb downstream 2.0kb downstream 4088 true Chr4: 55199-59286 Arabidopsis thaliana
AT4G00150 2.0kb downstream 2.0kb downstream 2000 false Chr4: 55199-57198 Arabidopsis thaliana
AT4G00150 5.0kb upstream 5.0kb upstream 7088 true Chr4: 57199-64286 Arabidopsis thaliana
AT4G00150 5.0kb upstream 5.0kb upstream 5000 false Chr4: 59287-64286 Arabidopsis thaliana
AT4G00150 5.0kb downstream 5.0kb downstream 7088 true Chr4: 52199-59286 Arabidopsis thaliana
AT4G00150 5.0kb downstream 5.0kb downstream 5000 false Chr4: 52199-57198 Arabidopsis thaliana
AT4G00150 10.0kb upstream 10.0kb upstream 12088 true Chr4: 57199-69286 Arabidopsis thaliana
AT4G00150 10.0kb upstream 10.0kb upstream 10000 false Chr4: 59287-69286 Arabidopsis thaliana
AT4G00150 10.0kb downstream 10.0kb downstream 12088 true Chr4: 47199-59286 Arabidopsis thaliana
AT4G00150 10.0kb downstream 10.0kb downstream 10000 false Chr4: 47199-57198 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367532 5261 Brassicaceae View MSA
123841679 5264 Brassicales-Malvales View MSA
124337623 5266 SBM View MSA
124250947 5268 Malvidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.154        
cufflinks 6.724        
cufflinks 8.576        
cufflinks 9.07       High
cufflinks 5.277       Low
cufflinks 6.604        

0 Strain