Gene : BB A. thaliana TAIR10
Primary Identifier:  ? AT3G63530 Defline:  (1 of 1) PTHR14155//PTHR14155:SF75 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN LIGASE BIG BROTHER
Genomic Order:  5436 Name:  ? AT3G63530
Secondary Identifier:  ? PAC:19658493
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G63530 0.5kb upstream 0.5kb upstream 2803 true Chr3: 23456157-23458959 Arabidopsis thaliana
AT3G63530 0.5kb upstream 0.5kb upstream 500 false Chr3: 23458460-23458959 Arabidopsis thaliana
AT3G63530 0.5kb downstream 0.5kb downstream 2803 true Chr3: 23455657-23458459 Arabidopsis thaliana
AT3G63530 0.5kb downstream 0.5kb downstream 500 false Chr3: 23455657-23456156 Arabidopsis thaliana
AT3G63530 1.0kb upstream 1.0kb upstream 3303 true Chr3: 23456157-23459459 Arabidopsis thaliana
AT3G63530 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23458460-23459459 Arabidopsis thaliana
AT3G63530 1.0kb downstream 1.0kb downstream 3303 true Chr3: 23455157-23458459 Arabidopsis thaliana
AT3G63530 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23455157-23456156 Arabidopsis thaliana
AT3G63530 2.0kb upstream 2.0kb upstream 3674 true Chr3: 23456157-23459830 Arabidopsis thaliana
AT3G63530 2.0kb upstream 2.0kb upstream 1371 false Chr3: 23458460-23459830 Arabidopsis thaliana
AT3G63530 2.0kb downstream 2.0kb downstream 4303 true Chr3: 23454157-23458459 Arabidopsis thaliana
AT3G63530 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23454157-23456156 Arabidopsis thaliana
AT3G63530 5.0kb upstream 5.0kb upstream 3674 true Chr3: 23456157-23459830 Arabidopsis thaliana
AT3G63530 5.0kb upstream 5.0kb upstream 1371 false Chr3: 23458460-23459830 Arabidopsis thaliana
AT3G63530 5.0kb downstream 5.0kb downstream 7303 true Chr3: 23451157-23458459 Arabidopsis thaliana
AT3G63530 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23451157-23456156 Arabidopsis thaliana
AT3G63530 10.0kb upstream 10.0kb upstream 3674 true Chr3: 23456157-23459830 Arabidopsis thaliana
AT3G63530 10.0kb upstream 10.0kb upstream 1371 false Chr3: 23458460-23459830 Arabidopsis thaliana
AT3G63530 10.0kb downstream 10.0kb downstream 12303 true Chr3: 23446157-23458459 Arabidopsis thaliana
AT3G63530 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23446157-23456156 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367401 5261 Brassicaceae View MSA
123835643 5264 Brassicales-Malvales View MSA
124349516 5266 SBM View MSA
124246466 5268 Malvidae View MSA
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.001        
cufflinks 4.615        
cufflinks 0.738        
cufflinks 3.749        
cufflinks 0.674       Low
cufflinks 4.653        

0 Strain