Gene : AT3G63490 A. thaliana TAIR10
Defline:  (1 of 1) K02863 - large subunit ribosomal protein L1 (RP-L1, MRPL1, rplA) Genomic Order:  5432
Name:  ? AT3G63490 Secondary Identifier:  ? PAC:19663202
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G63490 0.5kb upstream 0.5kb upstream 2653 true Chr3: 23443703-23446355 Arabidopsis thaliana
AT3G63490 0.5kb upstream 0.5kb upstream 500 false Chr3: 23443703-23444202 Arabidopsis thaliana
AT3G63490 0.5kb downstream 0.5kb downstream 2653 true Chr3: 23444203-23446855 Arabidopsis thaliana
AT3G63490 0.5kb downstream 0.5kb downstream 500 false Chr3: 23446356-23446855 Arabidopsis thaliana
AT3G63490 1.0kb upstream 1.0kb upstream 3153 true Chr3: 23443203-23446355 Arabidopsis thaliana
AT3G63490 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23443203-23444202 Arabidopsis thaliana
AT3G63490 1.0kb downstream 1.0kb downstream 3153 true Chr3: 23444203-23447355 Arabidopsis thaliana
AT3G63490 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23446356-23447355 Arabidopsis thaliana
AT3G63490 2.0kb upstream 2.0kb upstream 4153 true Chr3: 23442203-23446355 Arabidopsis thaliana
AT3G63490 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23442203-23444202 Arabidopsis thaliana
AT3G63490 2.0kb downstream 2.0kb downstream 4153 true Chr3: 23444203-23448355 Arabidopsis thaliana
AT3G63490 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23446356-23448355 Arabidopsis thaliana
AT3G63490 5.0kb upstream 5.0kb upstream 7153 true Chr3: 23439203-23446355 Arabidopsis thaliana
AT3G63490 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23439203-23444202 Arabidopsis thaliana
AT3G63490 5.0kb downstream 5.0kb downstream 7153 true Chr3: 23444203-23451355 Arabidopsis thaliana
AT3G63490 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23446356-23451355 Arabidopsis thaliana
AT3G63490 10.0kb upstream 10.0kb upstream 12153 true Chr3: 23434203-23446355 Arabidopsis thaliana
AT3G63490 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23434203-23444202 Arabidopsis thaliana
AT3G63490 10.0kb downstream 10.0kb downstream 12153 true Chr3: 23444203-23456355 Arabidopsis thaliana
AT3G63490 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23446356-23456355 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374657 5261 Brassicaceae View MSA
123833583 5264 Brassicales-Malvales View MSA
124339501 5266 SBM View MSA
124237610 5268 Malvidae View MSA
124061690 5270 Rosid View MSA
123738207 5271 Pentapetalae View MSA
122788620 5272 Eudicot View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.014     High  
cufflinks 4.955        
cufflinks 118.176     High High
cufflinks 5.548        
cufflinks 95.013     High  
cufflinks 4.45        

0 Strain