Gene : CKX6 A. thaliana TAIR10
Primary Identifier:  ? AT3G63440 Defline:  (1 of 2) PTHR13878:SF53 - CYTOKININ DEHYDROGENASE 6
Genomic Order:  5427 Name:  ? AT3G63440
Secondary Identifier:  ? PAC:19664987
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G63440 0.5kb upstream 0.5kb upstream 2880 true Chr3: 23423657-23426536 Arabidopsis thaliana
AT3G63440 0.5kb upstream 0.5kb upstream 500 false Chr3: 23423657-23424156 Arabidopsis thaliana
AT3G63440 0.5kb downstream 0.5kb downstream 2880 true Chr3: 23424157-23427036 Arabidopsis thaliana
AT3G63440 0.5kb downstream 0.5kb downstream 500 false Chr3: 23426537-23427036 Arabidopsis thaliana
AT3G63440 1.0kb upstream 1.0kb upstream 3380 true Chr3: 23423157-23426536 Arabidopsis thaliana
AT3G63440 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23423157-23424156 Arabidopsis thaliana
AT3G63440 1.0kb downstream 1.0kb downstream 3380 true Chr3: 23424157-23427536 Arabidopsis thaliana
AT3G63440 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23426537-23427536 Arabidopsis thaliana
AT3G63440 2.0kb upstream 2.0kb upstream 4380 true Chr3: 23422157-23426536 Arabidopsis thaliana
AT3G63440 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23422157-23424156 Arabidopsis thaliana
AT3G63440 2.0kb downstream 2.0kb downstream 4380 true Chr3: 23424157-23428536 Arabidopsis thaliana
AT3G63440 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23426537-23428536 Arabidopsis thaliana
AT3G63440 5.0kb upstream 5.0kb upstream 7380 true Chr3: 23419157-23426536 Arabidopsis thaliana
AT3G63440 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23419157-23424156 Arabidopsis thaliana
AT3G63440 5.0kb downstream 5.0kb downstream 7380 true Chr3: 23424157-23431536 Arabidopsis thaliana
AT3G63440 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23426537-23431536 Arabidopsis thaliana
AT3G63440 10.0kb upstream 10.0kb upstream 12380 true Chr3: 23414157-23426536 Arabidopsis thaliana
AT3G63440 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23414157-23424156 Arabidopsis thaliana
AT3G63440 10.0kb downstream 10.0kb downstream 12380 true Chr3: 23424157-23436536 Arabidopsis thaliana
AT3G63440 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23426537-23436536 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365094 5261 Brassicaceae View MSA
123836341 5264 Brassicales-Malvales View MSA
124339803 5266 SBM View MSA
124238752 5268 Malvidae View MSA
124067544 5270 Rosid View MSA
123739719 5271 Pentapetalae View MSA
122789559 5272 Eudicot View MSA
122043660 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.266        
cufflinks 16.594        
cufflinks 1.149        
cufflinks 15.621        
cufflinks 0.854       Low
cufflinks 31.005     High High

0 Strain