Gene : AT3G63270 A. thaliana TAIR10
Defline:  (1 of 8) KOG4585 - Predicted transposase Genomic Order:  5411
Name:  ? AT3G63270 Secondary Identifier:  ? PAC:19661356
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G63270 0.5kb upstream 0.5kb upstream 2357 true Chr3: 23375617-23377973 Arabidopsis thaliana
AT3G63270 0.5kb upstream 0.5kb upstream 500 false Chr3: 23377474-23377973 Arabidopsis thaliana
AT3G63270 0.5kb downstream 0.5kb downstream 2357 true Chr3: 23375117-23377473 Arabidopsis thaliana
AT3G63270 0.5kb downstream 0.5kb downstream 500 false Chr3: 23375117-23375616 Arabidopsis thaliana
AT3G63270 1.0kb upstream 1.0kb upstream 2857 true Chr3: 23375617-23378473 Arabidopsis thaliana
AT3G63270 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23377474-23378473 Arabidopsis thaliana
AT3G63270 1.0kb downstream 1.0kb downstream 2857 true Chr3: 23374617-23377473 Arabidopsis thaliana
AT3G63270 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23374617-23375616 Arabidopsis thaliana
AT3G63270 2.0kb upstream 2.0kb upstream 3857 true Chr3: 23375617-23379473 Arabidopsis thaliana
AT3G63270 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23377474-23379473 Arabidopsis thaliana
AT3G63270 2.0kb downstream 2.0kb downstream 3857 true Chr3: 23373617-23377473 Arabidopsis thaliana
AT3G63270 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23373617-23375616 Arabidopsis thaliana
AT3G63270 5.0kb upstream 5.0kb upstream 6857 true Chr3: 23375617-23382473 Arabidopsis thaliana
AT3G63270 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23377474-23382473 Arabidopsis thaliana
AT3G63270 5.0kb downstream 5.0kb downstream 6857 true Chr3: 23370617-23377473 Arabidopsis thaliana
AT3G63270 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23370617-23375616 Arabidopsis thaliana
AT3G63270 10.0kb upstream 10.0kb upstream 11857 true Chr3: 23375617-23387473 Arabidopsis thaliana
AT3G63270 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23377474-23387473 Arabidopsis thaliana
AT3G63270 10.0kb downstream 10.0kb downstream 11857 true Chr3: 23365617-23377473 Arabidopsis thaliana
AT3G63270 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23365617-23375616 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332096 5261 Brassicaceae View MSA
123833431 5264 Brassicales-Malvales View MSA
124321871 5266 SBM View MSA
124244774 5268 Malvidae View MSA
124064541 5270 Rosid View MSA
123744924 5271 Pentapetalae View MSA
122771301 5272 Eudicot View MSA
122043716 5273 Angiosperm View MSA
121348117 5274 Embryophyte View MSA
123380731 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.661        
cufflinks 8.427        
cufflinks 5.004       Low
cufflinks 7.178        
cufflinks 5.444       Low
cufflinks 8.463        

0 Strain