Gene : IPT3 A. thaliana TAIR10
Primary Identifier:  ? AT3G63110 Defline:  (1 of 2) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC
Genomic Order:  5394 Name:  ? AT3G63110
Secondary Identifier:  ? PAC:19660117
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-2681 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G63110 0.5kb upstream 0.5kb upstream 1965 true Chr3: 23318076-23320040 Arabidopsis thaliana
AT3G63110 0.5kb upstream 0.5kb upstream 500 false Chr3: 23319541-23320040 Arabidopsis thaliana
AT3G63110 0.5kb downstream 0.5kb downstream 1965 true Chr3: 23317576-23319540 Arabidopsis thaliana
AT3G63110 0.5kb downstream 0.5kb downstream 500 false Chr3: 23317576-23318075 Arabidopsis thaliana
AT3G63110 1.0kb upstream 1.0kb upstream 2465 true Chr3: 23318076-23320540 Arabidopsis thaliana
AT3G63110 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23319541-23320540 Arabidopsis thaliana
AT3G63110 1.0kb downstream 1.0kb downstream 2465 true Chr3: 23317076-23319540 Arabidopsis thaliana
AT3G63110 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23317076-23318075 Arabidopsis thaliana
AT3G63110 2.0kb upstream 2.0kb upstream 3465 true Chr3: 23318076-23321540 Arabidopsis thaliana
AT3G63110 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23319541-23321540 Arabidopsis thaliana
AT3G63110 2.0kb downstream 2.0kb downstream 3465 true Chr3: 23316076-23319540 Arabidopsis thaliana
AT3G63110 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23316076-23318075 Arabidopsis thaliana
AT3G63110 5.0kb upstream 5.0kb upstream 6465 true Chr3: 23318076-23324540 Arabidopsis thaliana
AT3G63110 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23319541-23324540 Arabidopsis thaliana
AT3G63110 5.0kb downstream 5.0kb downstream 6465 true Chr3: 23313076-23319540 Arabidopsis thaliana
AT3G63110 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23313076-23318075 Arabidopsis thaliana
AT3G63110 10.0kb upstream 10.0kb upstream 11465 true Chr3: 23318076-23329540 Arabidopsis thaliana
AT3G63110 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23319541-23329540 Arabidopsis thaliana
AT3G63110 10.0kb downstream 10.0kb downstream 11465 true Chr3: 23308076-23319540 Arabidopsis thaliana
AT3G63110 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23308076-23318075 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374525 5261 Brassicaceae View MSA
123836221 5264 Brassicales-Malvales View MSA
124350163 5266 SBM View MSA
124241505 5268 Malvidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.718        
cufflinks 29.481     High  
cufflinks 1.627        
cufflinks 17.673        
cufflinks 0.691       Low
cufflinks 33.701     High High

0 Strain