Gene : AT3G62930 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10168//PTHR10168:SF81 - GLUTAREDOXIN // MONOTHIOL GLUTAREDOXIN-S1-RELATED Genomic Order:  5373
Name:  ? AT3G62930 Secondary Identifier:  ? PAC:19660077
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana THIOREDOX-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62930 0.5kb upstream 0.5kb upstream 986 true Chr3: 23261442-23262427 Arabidopsis thaliana
AT3G62930 0.5kb upstream 0.5kb upstream 500 false Chr3: 23261928-23262427 Arabidopsis thaliana
AT3G62930 0.5kb downstream 0.5kb downstream 986 true Chr3: 23260942-23261927 Arabidopsis thaliana
AT3G62930 0.5kb downstream 0.5kb downstream 500 false Chr3: 23260942-23261441 Arabidopsis thaliana
AT3G62930 1.0kb upstream 1.0kb upstream 1486 true Chr3: 23261442-23262927 Arabidopsis thaliana
AT3G62930 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23261928-23262927 Arabidopsis thaliana
AT3G62930 1.0kb downstream 1.0kb downstream 1486 true Chr3: 23260442-23261927 Arabidopsis thaliana
AT3G62930 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23260442-23261441 Arabidopsis thaliana
AT3G62930 2.0kb upstream 2.0kb upstream 2486 true Chr3: 23261442-23263927 Arabidopsis thaliana
AT3G62930 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23261928-23263927 Arabidopsis thaliana
AT3G62930 2.0kb downstream 2.0kb downstream 2486 true Chr3: 23259442-23261927 Arabidopsis thaliana
AT3G62930 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23259442-23261441 Arabidopsis thaliana
AT3G62930 5.0kb upstream 5.0kb upstream 5486 true Chr3: 23261442-23266927 Arabidopsis thaliana
AT3G62930 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23261928-23266927 Arabidopsis thaliana
AT3G62930 5.0kb downstream 5.0kb downstream 5486 true Chr3: 23256442-23261927 Arabidopsis thaliana
AT3G62930 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23256442-23261441 Arabidopsis thaliana
AT3G62930 10.0kb upstream 10.0kb upstream 10486 true Chr3: 23261442-23271927 Arabidopsis thaliana
AT3G62930 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23261928-23271927 Arabidopsis thaliana
AT3G62930 10.0kb downstream 10.0kb downstream 10486 true Chr3: 23251442-23261927 Arabidopsis thaliana
AT3G62930 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23251442-23261441 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360767 5261 Brassicaceae View MSA
123841307 5264 Brassicales-Malvales View MSA
124351084 5266 SBM View MSA
124251213 5268 Malvidae View MSA
124070474 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.834        
cufflinks 1.742        
cufflinks 3.606        
cufflinks 0.569       Low
cufflinks 3.023        
cufflinks 4.553        

0 Strain