Gene : APG3 A. thaliana TAIR10
Primary Identifier:  ? AT3G62910 Defline:  (1 of 2) K02835 - peptide chain release factor 1 (prfA, MTRF1, MRF1)
Genomic Order:  5371 Name:  ? AT3G62910
Secondary Identifier:  ? PAC:19662220
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62910 0.5kb upstream 0.5kb upstream 3374 true Chr3: 23257554-23260927 Arabidopsis thaliana
AT3G62910 0.5kb upstream 0.5kb upstream 500 false Chr3: 23260428-23260927 Arabidopsis thaliana
AT3G62910 0.5kb downstream 0.5kb downstream 3374 true Chr3: 23257054-23260427 Arabidopsis thaliana
AT3G62910 0.5kb downstream 0.5kb downstream 500 false Chr3: 23257054-23257553 Arabidopsis thaliana
AT3G62910 1.0kb upstream 1.0kb upstream 3874 true Chr3: 23257554-23261427 Arabidopsis thaliana
AT3G62910 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23260428-23261427 Arabidopsis thaliana
AT3G62910 1.0kb downstream 1.0kb downstream 3874 true Chr3: 23256554-23260427 Arabidopsis thaliana
AT3G62910 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23256554-23257553 Arabidopsis thaliana
AT3G62910 2.0kb upstream 2.0kb upstream 4874 true Chr3: 23257554-23262427 Arabidopsis thaliana
AT3G62910 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23260428-23262427 Arabidopsis thaliana
AT3G62910 2.0kb downstream 2.0kb downstream 4874 true Chr3: 23255554-23260427 Arabidopsis thaliana
AT3G62910 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23255554-23257553 Arabidopsis thaliana
AT3G62910 5.0kb upstream 5.0kb upstream 7874 true Chr3: 23257554-23265427 Arabidopsis thaliana
AT3G62910 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23260428-23265427 Arabidopsis thaliana
AT3G62910 5.0kb downstream 5.0kb downstream 7874 true Chr3: 23252554-23260427 Arabidopsis thaliana
AT3G62910 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23252554-23257553 Arabidopsis thaliana
AT3G62910 10.0kb upstream 10.0kb upstream 12874 true Chr3: 23257554-23270427 Arabidopsis thaliana
AT3G62910 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23260428-23270427 Arabidopsis thaliana
AT3G62910 10.0kb downstream 10.0kb downstream 12874 true Chr3: 23247554-23260427 Arabidopsis thaliana
AT3G62910 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23247554-23257553 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041311 5273 Angiosperm View MSA
122373799 5261 Brassicaceae View MSA
123832373 5264 Brassicales-Malvales View MSA
124343681 5266 SBM View MSA
124242174 5268 Malvidae View MSA
124062646 5270 Rosid View MSA
123740537 5271 Pentapetalae View MSA
122789829 5272 Eudicot View MSA
121344986 5274 Embryophyte View MSA
123425120 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.809        
cufflinks 0.742        
cufflinks 15.842        
cufflinks 0.858        
cufflinks 11.39        
cufflinks 0.514       Low

0 Strain