Gene : AT3G62630 A. thaliana TAIR10
Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  5342
Name:  ? AT3G62630 Secondary Identifier:  ? PAC:19659007
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62630 0.5kb upstream 0.5kb upstream 1949 true Chr3: 23163747-23165695 Arabidopsis thaliana
AT3G62630 0.5kb upstream 0.5kb upstream 500 false Chr3: 23165196-23165695 Arabidopsis thaliana
AT3G62630 0.5kb downstream 0.5kb downstream 1949 true Chr3: 23163247-23165195 Arabidopsis thaliana
AT3G62630 0.5kb downstream 0.5kb downstream 500 false Chr3: 23163247-23163746 Arabidopsis thaliana
AT3G62630 1.0kb upstream 1.0kb upstream 2449 true Chr3: 23163747-23166195 Arabidopsis thaliana
AT3G62630 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23165196-23166195 Arabidopsis thaliana
AT3G62630 1.0kb downstream 1.0kb downstream 2449 true Chr3: 23162747-23165195 Arabidopsis thaliana
AT3G62630 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23162747-23163746 Arabidopsis thaliana
AT3G62630 2.0kb upstream 2.0kb upstream 3449 true Chr3: 23163747-23167195 Arabidopsis thaliana
AT3G62630 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23165196-23167195 Arabidopsis thaliana
AT3G62630 2.0kb downstream 2.0kb downstream 3449 true Chr3: 23161747-23165195 Arabidopsis thaliana
AT3G62630 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23161747-23163746 Arabidopsis thaliana
AT3G62630 5.0kb upstream 5.0kb upstream 6449 true Chr3: 23163747-23170195 Arabidopsis thaliana
AT3G62630 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23165196-23170195 Arabidopsis thaliana
AT3G62630 5.0kb downstream 5.0kb downstream 6449 true Chr3: 23158747-23165195 Arabidopsis thaliana
AT3G62630 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23158747-23163746 Arabidopsis thaliana
AT3G62630 10.0kb upstream 10.0kb upstream 11449 true Chr3: 23163747-23175195 Arabidopsis thaliana
AT3G62630 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23165196-23175195 Arabidopsis thaliana
AT3G62630 10.0kb downstream 10.0kb downstream 11449 true Chr3: 23153747-23165195 Arabidopsis thaliana
AT3G62630 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23153747-23163746 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378248 5261 Brassicaceae View MSA
123829546 5264 Brassicales-Malvales View MSA
124344695 5266 SBM View MSA
124253628 5268 Malvidae View MSA
124062410 5270 Rosid View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.507       High
cufflinks 5.377       Low
cufflinks 10.87        
cufflinks 7.61        
cufflinks 13.463        
cufflinks 8.251        

0 Strain