Gene : AT3G62360 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23303 - CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING Genomic Order:  5315
Name:  ? AT3G62360 Secondary Identifier:  ? PAC:19660174
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62360 0.5kb upstream 0.5kb upstream 8278 true Chr3: 23072786-23081063 Arabidopsis thaliana
AT3G62360 0.5kb upstream 0.5kb upstream 500 false Chr3: 23080564-23081063 Arabidopsis thaliana
AT3G62360 0.5kb downstream 0.5kb downstream 8278 true Chr3: 23072286-23080563 Arabidopsis thaliana
AT3G62360 0.5kb downstream 0.5kb downstream 500 false Chr3: 23072286-23072785 Arabidopsis thaliana
AT3G62360 1.0kb upstream 1.0kb upstream 8778 true Chr3: 23072786-23081563 Arabidopsis thaliana
AT3G62360 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23080564-23081563 Arabidopsis thaliana
AT3G62360 1.0kb downstream 1.0kb downstream 8778 true Chr3: 23071786-23080563 Arabidopsis thaliana
AT3G62360 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23071786-23072785 Arabidopsis thaliana
AT3G62360 2.0kb upstream 2.0kb upstream 9778 true Chr3: 23072786-23082563 Arabidopsis thaliana
AT3G62360 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23080564-23082563 Arabidopsis thaliana
AT3G62360 2.0kb downstream 2.0kb downstream 9778 true Chr3: 23070786-23080563 Arabidopsis thaliana
AT3G62360 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23070786-23072785 Arabidopsis thaliana
AT3G62360 5.0kb upstream 5.0kb upstream 12778 true Chr3: 23072786-23085563 Arabidopsis thaliana
AT3G62360 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23080564-23085563 Arabidopsis thaliana
AT3G62360 5.0kb downstream 5.0kb downstream 12778 true Chr3: 23067786-23080563 Arabidopsis thaliana
AT3G62360 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23067786-23072785 Arabidopsis thaliana
AT3G62360 10.0kb upstream 10.0kb upstream 17778 true Chr3: 23072786-23090563 Arabidopsis thaliana
AT3G62360 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23080564-23090563 Arabidopsis thaliana
AT3G62360 10.0kb downstream 10.0kb downstream 17778 true Chr3: 23062786-23080563 Arabidopsis thaliana
AT3G62360 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23062786-23072785 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367187 5261 Brassicaceae View MSA
123834532 5264 Brassicales-Malvales View MSA
124344548 5266 SBM View MSA
124240793 5268 Malvidae View MSA
124064974 5270 Rosid View MSA
123737626 5271 Pentapetalae View MSA
122788154 5272 Eudicot View MSA
122048074 5273 Angiosperm View MSA
121346415 5274 Embryophyte View MSA
123380379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.25        
cufflinks 19.789        
cufflinks 12.346       Low
cufflinks 23.855        
cufflinks 12.541       Low
cufflinks 25.505       High

0 Strain