Gene : MYB55 A. thaliana TAIR10
Primary Identifier:  ? AT4G01680 Defline:  (1 of 2) PTHR10641//PTHR10641:SF618 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 55
Genomic Order:  195 Name:  ? AT4G01680
Secondary Identifier:  ? PAC:19647658
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01680 0.5kb upstream 0.5kb upstream 2076 true Chr4: 716004-718079 Arabidopsis thaliana
AT4G01680 0.5kb upstream 0.5kb upstream 500 false Chr4: 717580-718079 Arabidopsis thaliana
AT4G01680 0.5kb downstream 0.5kb downstream 2076 true Chr4: 715504-717579 Arabidopsis thaliana
AT4G01680 0.5kb downstream 0.5kb downstream 500 false Chr4: 715504-716003 Arabidopsis thaliana
AT4G01680 1.0kb upstream 1.0kb upstream 2576 true Chr4: 716004-718579 Arabidopsis thaliana
AT4G01680 1.0kb upstream 1.0kb upstream 1000 false Chr4: 717580-718579 Arabidopsis thaliana
AT4G01680 1.0kb downstream 1.0kb downstream 2576 true Chr4: 715004-717579 Arabidopsis thaliana
AT4G01680 1.0kb downstream 1.0kb downstream 1000 false Chr4: 715004-716003 Arabidopsis thaliana
AT4G01680 2.0kb upstream 2.0kb upstream 3576 true Chr4: 716004-719579 Arabidopsis thaliana
AT4G01680 2.0kb upstream 2.0kb upstream 2000 false Chr4: 717580-719579 Arabidopsis thaliana
AT4G01680 2.0kb downstream 2.0kb downstream 3576 true Chr4: 714004-717579 Arabidopsis thaliana
AT4G01680 2.0kb downstream 2.0kb downstream 2000 false Chr4: 714004-716003 Arabidopsis thaliana
AT4G01680 5.0kb upstream 5.0kb upstream 6576 true Chr4: 716004-722579 Arabidopsis thaliana
AT4G01680 5.0kb upstream 5.0kb upstream 5000 false Chr4: 717580-722579 Arabidopsis thaliana
AT4G01680 5.0kb downstream 5.0kb downstream 6576 true Chr4: 711004-717579 Arabidopsis thaliana
AT4G01680 5.0kb downstream 5.0kb downstream 5000 false Chr4: 711004-716003 Arabidopsis thaliana
AT4G01680 10.0kb upstream 10.0kb upstream 11576 true Chr4: 716004-727579 Arabidopsis thaliana
AT4G01680 10.0kb upstream 10.0kb upstream 10000 false Chr4: 717580-727579 Arabidopsis thaliana
AT4G01680 10.0kb downstream 10.0kb downstream 11576 true Chr4: 706004-717579 Arabidopsis thaliana
AT4G01680 10.0kb downstream 10.0kb downstream 10000 false Chr4: 706004-716003 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373215 5261 Brassicaceae View MSA
123840372 5264 Brassicales-Malvales View MSA
124348211 5266 SBM View MSA
124251841 5268 Malvidae View MSA
124070953 5270 Rosid View MSA
123745100 5271 Pentapetalae View MSA
122796774 5272 Eudicot View MSA
122046378 5273 Angiosperm View MSA
121349090 5274 Embryophyte View MSA
123381162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.908       High
cufflinks 0.126     Low Low
cufflinks 0.441        
cufflinks 0.177     Low  
cufflinks 0.297        
cufflinks 0.317     Low  

0 Strain