Gene : AT4G01610 A. thaliana TAIR10
Defline:  (1 of 3) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  188
Name:  ? AT4G01610 Secondary Identifier:  ? PAC:19646602
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01610 0.5kb upstream 0.5kb upstream 3012 true Chr4: 694195-697206 Arabidopsis thaliana
AT4G01610 0.5kb upstream 0.5kb upstream 500 false Chr4: 694195-694694 Arabidopsis thaliana
AT4G01610 0.5kb downstream 0.5kb downstream 3012 true Chr4: 694695-697706 Arabidopsis thaliana
AT4G01610 0.5kb downstream 0.5kb downstream 500 false Chr4: 697207-697706 Arabidopsis thaliana
AT4G01610 1.0kb upstream 1.0kb upstream 3512 true Chr4: 693695-697206 Arabidopsis thaliana
AT4G01610 1.0kb upstream 1.0kb upstream 1000 false Chr4: 693695-694694 Arabidopsis thaliana
AT4G01610 1.0kb downstream 1.0kb downstream 3512 true Chr4: 694695-698206 Arabidopsis thaliana
AT4G01610 1.0kb downstream 1.0kb downstream 1000 false Chr4: 697207-698206 Arabidopsis thaliana
AT4G01610 2.0kb upstream 2.0kb upstream 4512 true Chr4: 692695-697206 Arabidopsis thaliana
AT4G01610 2.0kb upstream 2.0kb upstream 2000 false Chr4: 692695-694694 Arabidopsis thaliana
AT4G01610 2.0kb downstream 2.0kb downstream 4512 true Chr4: 694695-699206 Arabidopsis thaliana
AT4G01610 2.0kb downstream 2.0kb downstream 2000 false Chr4: 697207-699206 Arabidopsis thaliana
AT4G01610 5.0kb upstream 5.0kb upstream 7512 true Chr4: 689695-697206 Arabidopsis thaliana
AT4G01610 5.0kb upstream 5.0kb upstream 5000 false Chr4: 689695-694694 Arabidopsis thaliana
AT4G01610 5.0kb downstream 5.0kb downstream 7512 true Chr4: 694695-702206 Arabidopsis thaliana
AT4G01610 5.0kb downstream 5.0kb downstream 5000 false Chr4: 697207-702206 Arabidopsis thaliana
AT4G01610 10.0kb upstream 10.0kb upstream 12512 true Chr4: 684695-697206 Arabidopsis thaliana
AT4G01610 10.0kb upstream 10.0kb upstream 10000 false Chr4: 684695-694694 Arabidopsis thaliana
AT4G01610 10.0kb downstream 10.0kb downstream 12512 true Chr4: 694695-707206 Arabidopsis thaliana
AT4G01610 10.0kb downstream 10.0kb downstream 10000 false Chr4: 697207-707206 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368081 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.601     High  
cufflinks 35.329     High  
cufflinks 33.164     High Low
cufflinks 48.424     High High
cufflinks 43.318     High  
cufflinks 37.368     High  

0 Strain