Gene : AT4G01390 A. thaliana TAIR10
Defline:  (1 of 85) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase Genomic Order:  164
Name:  ? AT4G01390 Secondary Identifier:  ? PAC:19647262
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01390 0.5kb upstream 0.5kb upstream 1854 true Chr4: 570242-572095 Arabidopsis thaliana
AT4G01390 0.5kb upstream 0.5kb upstream 500 false Chr4: 571596-572095 Arabidopsis thaliana
AT4G01390 0.5kb downstream 0.5kb downstream 1854 true Chr4: 569742-571595 Arabidopsis thaliana
AT4G01390 0.5kb downstream 0.5kb downstream 500 false Chr4: 569742-570241 Arabidopsis thaliana
AT4G01390 1.0kb upstream 1.0kb upstream 2354 true Chr4: 570242-572595 Arabidopsis thaliana
AT4G01390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 571596-572595 Arabidopsis thaliana
AT4G01390 1.0kb downstream 1.0kb downstream 2354 true Chr4: 569242-571595 Arabidopsis thaliana
AT4G01390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 569242-570241 Arabidopsis thaliana
AT4G01390 2.0kb upstream 2.0kb upstream 3354 true Chr4: 570242-573595 Arabidopsis thaliana
AT4G01390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 571596-573595 Arabidopsis thaliana
AT4G01390 2.0kb downstream 2.0kb downstream 3354 true Chr4: 568242-571595 Arabidopsis thaliana
AT4G01390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 568242-570241 Arabidopsis thaliana
AT4G01390 5.0kb upstream 5.0kb upstream 6354 true Chr4: 570242-576595 Arabidopsis thaliana
AT4G01390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 571596-576595 Arabidopsis thaliana
AT4G01390 5.0kb downstream 5.0kb downstream 6354 true Chr4: 565242-571595 Arabidopsis thaliana
AT4G01390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 565242-570241 Arabidopsis thaliana
AT4G01390 10.0kb upstream 10.0kb upstream 11354 true Chr4: 570242-581595 Arabidopsis thaliana
AT4G01390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 571596-581595 Arabidopsis thaliana
AT4G01390 10.0kb downstream 10.0kb downstream 11354 true Chr4: 560242-571595 Arabidopsis thaliana
AT4G01390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 560242-570241 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122344358 5261 Brassicaceae View MSA
123784379 5264 Brassicales-Malvales View MSA
124351714 5266 SBM View MSA
124255054 5268 Malvidae View MSA
124073089 5270 Rosid View MSA
123752970 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36       Low
cufflinks 498.625     High High
cufflinks 18.102        
cufflinks 414.038     High High
cufflinks 23.947        
cufflinks 33.737     High  

0 Strain