Gene : AT4G01310 A. thaliana TAIR10
Defline:  (1 of 1) K02931 - large subunit ribosomal protein L5 (RP-L5, MRPL5, rplE) Genomic Order:  154
Name:  ? AT4G01310 Secondary Identifier:  ? PAC:19644983
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01310 0.5kb upstream 0.5kb upstream 2078 true Chr4: 543970-546047 Arabidopsis thaliana
AT4G01310 0.5kb upstream 0.5kb upstream 500 false Chr4: 545548-546047 Arabidopsis thaliana
AT4G01310 0.5kb downstream 0.5kb downstream 2078 true Chr4: 543470-545547 Arabidopsis thaliana
AT4G01310 0.5kb downstream 0.5kb downstream 500 false Chr4: 543470-543969 Arabidopsis thaliana
AT4G01310 1.0kb upstream 1.0kb upstream 2578 true Chr4: 543970-546547 Arabidopsis thaliana
AT4G01310 1.0kb upstream 1.0kb upstream 1000 false Chr4: 545548-546547 Arabidopsis thaliana
AT4G01310 1.0kb downstream 1.0kb downstream 2578 true Chr4: 542970-545547 Arabidopsis thaliana
AT4G01310 1.0kb downstream 1.0kb downstream 1000 false Chr4: 542970-543969 Arabidopsis thaliana
AT4G01310 2.0kb upstream 2.0kb upstream 3578 true Chr4: 543970-547547 Arabidopsis thaliana
AT4G01310 2.0kb upstream 2.0kb upstream 2000 false Chr4: 545548-547547 Arabidopsis thaliana
AT4G01310 2.0kb downstream 2.0kb downstream 3578 true Chr4: 541970-545547 Arabidopsis thaliana
AT4G01310 2.0kb downstream 2.0kb downstream 2000 false Chr4: 541970-543969 Arabidopsis thaliana
AT4G01310 5.0kb upstream 5.0kb upstream 6578 true Chr4: 543970-550547 Arabidopsis thaliana
AT4G01310 5.0kb upstream 5.0kb upstream 5000 false Chr4: 545548-550547 Arabidopsis thaliana
AT4G01310 5.0kb downstream 5.0kb downstream 6578 true Chr4: 538970-545547 Arabidopsis thaliana
AT4G01310 5.0kb downstream 5.0kb downstream 5000 false Chr4: 538970-543969 Arabidopsis thaliana
AT4G01310 10.0kb upstream 10.0kb upstream 11578 true Chr4: 543970-555547 Arabidopsis thaliana
AT4G01310 10.0kb upstream 10.0kb upstream 10000 false Chr4: 545548-555547 Arabidopsis thaliana
AT4G01310 10.0kb downstream 10.0kb downstream 11578 true Chr4: 533970-545547 Arabidopsis thaliana
AT4G01310 10.0kb downstream 10.0kb downstream 10000 false Chr4: 533970-543969 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362542 5261 Brassicaceae View MSA
123834728 5264 Brassicales-Malvales View MSA
124337832 5266 SBM View MSA
124238405 5268 Malvidae View MSA
124062323 5270 Rosid View MSA
123738128 5271 Pentapetalae View MSA
122786254 5272 Eudicot View MSA
122047733 5273 Angiosperm View MSA
121345632 5274 Embryophyte View MSA
123380248 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 140.32     High  
cufflinks 9.582        
cufflinks 173.153     High High
cufflinks 8.658        
cufflinks 110.89     High  
cufflinks 9.463        

0 Strain