Gene : AT4G01170 A. thaliana TAIR10
Defline:  (1 of 4) PTHR34194:SF3 - F14J8.16 PROTEIN-RELATED Genomic Order:  140
Name:  ? AT4G01170 Secondary Identifier:  ? PAC:19644517
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01170 0.5kb upstream 0.5kb upstream 1835 true Chr4: 498997-500831 Arabidopsis thaliana
AT4G01170 0.5kb upstream 0.5kb upstream 500 false Chr4: 498997-499496 Arabidopsis thaliana
AT4G01170 0.5kb downstream 0.5kb downstream 1835 true Chr4: 499497-501331 Arabidopsis thaliana
AT4G01170 0.5kb downstream 0.5kb downstream 500 false Chr4: 500832-501331 Arabidopsis thaliana
AT4G01170 1.0kb upstream 1.0kb upstream 2335 true Chr4: 498497-500831 Arabidopsis thaliana
AT4G01170 1.0kb upstream 1.0kb upstream 1000 false Chr4: 498497-499496 Arabidopsis thaliana
AT4G01170 1.0kb downstream 1.0kb downstream 2335 true Chr4: 499497-501831 Arabidopsis thaliana
AT4G01170 1.0kb downstream 1.0kb downstream 1000 false Chr4: 500832-501831 Arabidopsis thaliana
AT4G01170 2.0kb upstream 2.0kb upstream 3335 true Chr4: 497497-500831 Arabidopsis thaliana
AT4G01170 2.0kb upstream 2.0kb upstream 2000 false Chr4: 497497-499496 Arabidopsis thaliana
AT4G01170 2.0kb downstream 2.0kb downstream 3335 true Chr4: 499497-502831 Arabidopsis thaliana
AT4G01170 2.0kb downstream 2.0kb downstream 2000 false Chr4: 500832-502831 Arabidopsis thaliana
AT4G01170 5.0kb upstream 5.0kb upstream 6335 true Chr4: 494497-500831 Arabidopsis thaliana
AT4G01170 5.0kb upstream 5.0kb upstream 5000 false Chr4: 494497-499496 Arabidopsis thaliana
AT4G01170 5.0kb downstream 5.0kb downstream 6335 true Chr4: 499497-505831 Arabidopsis thaliana
AT4G01170 5.0kb downstream 5.0kb downstream 5000 false Chr4: 500832-505831 Arabidopsis thaliana
AT4G01170 10.0kb upstream 10.0kb upstream 11335 true Chr4: 489497-500831 Arabidopsis thaliana
AT4G01170 10.0kb upstream 10.0kb upstream 10000 false Chr4: 489497-499496 Arabidopsis thaliana
AT4G01170 10.0kb downstream 10.0kb downstream 11335 true Chr4: 499497-510831 Arabidopsis thaliana
AT4G01170 10.0kb downstream 10.0kb downstream 10000 false Chr4: 500832-510831 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330417 5261 Brassicaceae Singleton cluster - no MSA
123771664 5264 Brassicales-Malvales Singleton cluster - no MSA
124270192 5266 SBM Singleton cluster - no MSA
124126285 5268 Malvidae Singleton cluster - no MSA
124069664 5270 Rosid View MSA
123743436 5271 Pentapetalae View MSA
122792304 5272 Eudicot View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain