Gene : AT4G01200 A. thaliana TAIR10
Defline:  (1 of 1) PTHR32246//PTHR32246:SF31 - FAMILY NOT NAMED // CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  143
Name:  ? AT4G01200 Secondary Identifier:  ? PAC:19647485
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01200 0.5kb upstream 0.5kb upstream 1616 true Chr4: 506511-508126 Arabidopsis thaliana
AT4G01200 0.5kb upstream 0.5kb upstream 500 false Chr4: 507627-508126 Arabidopsis thaliana
AT4G01200 0.5kb downstream 0.5kb downstream 1616 true Chr4: 506011-507626 Arabidopsis thaliana
AT4G01200 0.5kb downstream 0.5kb downstream 500 false Chr4: 506011-506510 Arabidopsis thaliana
AT4G01200 1.0kb upstream 1.0kb upstream 2116 true Chr4: 506511-508626 Arabidopsis thaliana
AT4G01200 1.0kb upstream 1.0kb upstream 1000 false Chr4: 507627-508626 Arabidopsis thaliana
AT4G01200 1.0kb downstream 1.0kb downstream 2116 true Chr4: 505511-507626 Arabidopsis thaliana
AT4G01200 1.0kb downstream 1.0kb downstream 1000 false Chr4: 505511-506510 Arabidopsis thaliana
AT4G01200 2.0kb upstream 2.0kb upstream 3116 true Chr4: 506511-509626 Arabidopsis thaliana
AT4G01200 2.0kb upstream 2.0kb upstream 2000 false Chr4: 507627-509626 Arabidopsis thaliana
AT4G01200 2.0kb downstream 2.0kb downstream 3116 true Chr4: 504511-507626 Arabidopsis thaliana
AT4G01200 2.0kb downstream 2.0kb downstream 2000 false Chr4: 504511-506510 Arabidopsis thaliana
AT4G01200 5.0kb upstream 5.0kb upstream 6116 true Chr4: 506511-512626 Arabidopsis thaliana
AT4G01200 5.0kb upstream 5.0kb upstream 5000 false Chr4: 507627-512626 Arabidopsis thaliana
AT4G01200 5.0kb downstream 5.0kb downstream 6116 true Chr4: 501511-507626 Arabidopsis thaliana
AT4G01200 5.0kb downstream 5.0kb downstream 5000 false Chr4: 501511-506510 Arabidopsis thaliana
AT4G01200 10.0kb upstream 10.0kb upstream 11116 true Chr4: 506511-517626 Arabidopsis thaliana
AT4G01200 10.0kb upstream 10.0kb upstream 10000 false Chr4: 507627-517626 Arabidopsis thaliana
AT4G01200 10.0kb downstream 10.0kb downstream 11116 true Chr4: 496511-507626 Arabidopsis thaliana
AT4G01200 10.0kb downstream 10.0kb downstream 10000 false Chr4: 496511-506510 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376857 5261 Brassicaceae View MSA
123831829 5264 Brassicales-Malvales View MSA
124339103 5266 SBM View MSA
124251741 5268 Malvidae View MSA
124063208 5270 Rosid View MSA
123738455 5271 Pentapetalae View MSA
122793043 5272 Eudicot View MSA
122048299 5273 Angiosperm View MSA
121351739 5274 Embryophyte View MSA
123427392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.004        
cufflinks 3.046        
cufflinks 1.744       Low
cufflinks 3.02        
cufflinks 1.871       Low
cufflinks 2.633        

0 Strain