Gene : TROL A. thaliana TAIR10
Primary Identifier:  ? AT4G01050 Defline:  (1 of 2) PTHR11177//PTHR11177:SF167 - CHITINASE // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC
Genomic Order:  128 Name:  ? AT4G01050
Secondary Identifier:  ? PAC:19645386
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01050 0.5kb upstream 0.5kb upstream 3243 true Chr4: 455268-458510 Arabidopsis thaliana
AT4G01050 0.5kb upstream 0.5kb upstream 500 false Chr4: 455268-455767 Arabidopsis thaliana
AT4G01050 0.5kb downstream 0.5kb downstream 3243 true Chr4: 455768-459010 Arabidopsis thaliana
AT4G01050 0.5kb downstream 0.5kb downstream 500 false Chr4: 458511-459010 Arabidopsis thaliana
AT4G01050 1.0kb upstream 1.0kb upstream 3743 true Chr4: 454768-458510 Arabidopsis thaliana
AT4G01050 1.0kb upstream 1.0kb upstream 1000 false Chr4: 454768-455767 Arabidopsis thaliana
AT4G01050 1.0kb downstream 1.0kb downstream 3743 true Chr4: 455768-459510 Arabidopsis thaliana
AT4G01050 1.0kb downstream 1.0kb downstream 1000 false Chr4: 458511-459510 Arabidopsis thaliana
AT4G01050 2.0kb upstream 2.0kb upstream 4743 true Chr4: 453768-458510 Arabidopsis thaliana
AT4G01050 2.0kb upstream 2.0kb upstream 2000 false Chr4: 453768-455767 Arabidopsis thaliana
AT4G01050 2.0kb downstream 2.0kb downstream 4743 true Chr4: 455768-460510 Arabidopsis thaliana
AT4G01050 2.0kb downstream 2.0kb downstream 2000 false Chr4: 458511-460510 Arabidopsis thaliana
AT4G01050 5.0kb upstream 5.0kb upstream 7743 true Chr4: 450768-458510 Arabidopsis thaliana
AT4G01050 5.0kb upstream 5.0kb upstream 5000 false Chr4: 450768-455767 Arabidopsis thaliana
AT4G01050 5.0kb downstream 5.0kb downstream 7743 true Chr4: 455768-463510 Arabidopsis thaliana
AT4G01050 5.0kb downstream 5.0kb downstream 5000 false Chr4: 458511-463510 Arabidopsis thaliana
AT4G01050 10.0kb upstream 10.0kb upstream 12743 true Chr4: 445768-458510 Arabidopsis thaliana
AT4G01050 10.0kb upstream 10.0kb upstream 10000 false Chr4: 445768-455767 Arabidopsis thaliana
AT4G01050 10.0kb downstream 10.0kb downstream 12743 true Chr4: 455768-468510 Arabidopsis thaliana
AT4G01050 10.0kb downstream 10.0kb downstream 10000 false Chr4: 458511-468510 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365783 5261 Brassicaceae View MSA
123830037 5264 Brassicales-Malvales View MSA
124343054 5266 SBM View MSA
124253715 5268 Malvidae View MSA
124066431 5270 Rosid View MSA
123750921 5271 Pentapetalae View MSA
122791613 5272 Eudicot View MSA
122044286 5273 Angiosperm View MSA
121344422 5274 Embryophyte View MSA
123425945 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 136.136     High  
cufflinks 5.403        
cufflinks 166.871     High  
cufflinks 5.606        
cufflinks 160.4     High  
cufflinks 2.914       Low

0 Strain