Gene : AT4G00840 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22883//PTHR22883:SF91 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PROTEIN S-ACYLTRANSFERASE 12-RELATED Genomic Order:  99
Name:  ? AT4G00840 Secondary Identifier:  ? PAC:19648668
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00840 0.5kb upstream 0.5kb upstream 2522 true Chr4: 355258-357779 Arabidopsis thaliana
AT4G00840 0.5kb upstream 0.5kb upstream 500 false Chr4: 357280-357779 Arabidopsis thaliana
AT4G00840 0.5kb downstream 0.5kb downstream 2522 true Chr4: 354758-357279 Arabidopsis thaliana
AT4G00840 0.5kb downstream 0.5kb downstream 500 false Chr4: 354758-355257 Arabidopsis thaliana
AT4G00840 1.0kb upstream 1.0kb upstream 3022 true Chr4: 355258-358279 Arabidopsis thaliana
AT4G00840 1.0kb upstream 1.0kb upstream 1000 false Chr4: 357280-358279 Arabidopsis thaliana
AT4G00840 1.0kb downstream 1.0kb downstream 3022 true Chr4: 354258-357279 Arabidopsis thaliana
AT4G00840 1.0kb downstream 1.0kb downstream 1000 false Chr4: 354258-355257 Arabidopsis thaliana
AT4G00840 2.0kb upstream 2.0kb upstream 4022 true Chr4: 355258-359279 Arabidopsis thaliana
AT4G00840 2.0kb upstream 2.0kb upstream 2000 false Chr4: 357280-359279 Arabidopsis thaliana
AT4G00840 2.0kb downstream 2.0kb downstream 4022 true Chr4: 353258-357279 Arabidopsis thaliana
AT4G00840 2.0kb downstream 2.0kb downstream 2000 false Chr4: 353258-355257 Arabidopsis thaliana
AT4G00840 5.0kb upstream 5.0kb upstream 7022 true Chr4: 355258-362279 Arabidopsis thaliana
AT4G00840 5.0kb upstream 5.0kb upstream 5000 false Chr4: 357280-362279 Arabidopsis thaliana
AT4G00840 5.0kb downstream 5.0kb downstream 7022 true Chr4: 350258-357279 Arabidopsis thaliana
AT4G00840 5.0kb downstream 5.0kb downstream 5000 false Chr4: 350258-355257 Arabidopsis thaliana
AT4G00840 10.0kb upstream 10.0kb upstream 12022 true Chr4: 355258-367279 Arabidopsis thaliana
AT4G00840 10.0kb upstream 10.0kb upstream 10000 false Chr4: 357280-367279 Arabidopsis thaliana
AT4G00840 10.0kb downstream 10.0kb downstream 12022 true Chr4: 345258-357279 Arabidopsis thaliana
AT4G00840 10.0kb downstream 10.0kb downstream 10000 false Chr4: 345258-355257 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366248 5261 Brassicaceae View MSA
123830724 5264 Brassicales-Malvales View MSA
124321690 5266 SBM View MSA
124245682 5268 Malvidae View MSA
124063930 5270 Rosid View MSA
123753690 5271 Pentapetalae View MSA
122792310 5272 Eudicot View MSA
122049662 5273 Angiosperm View MSA
121349206 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.303        
cufflinks 10.197        
cufflinks 5.237       Low
cufflinks 10.358        
cufflinks 5.69        
cufflinks 10.087        

0 Strain