Gene : CIP4.1 A. thaliana TAIR10
Primary Identifier:  ? AT4G00930 Defline:  (1 of 3) PTHR13164//PTHR13164:SF7 - CALICYLIN BINDING PROTEIN // COP1-INTERACTING PROTEIN 4-RELATED
Genomic Order:  112 Name:  ? AT4G00930
Secondary Identifier:  ? PAC:19647284
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00930 0.5kb upstream 0.5kb upstream 4677 true Chr4: 396058-400734 Arabidopsis thaliana
AT4G00930 0.5kb upstream 0.5kb upstream 500 false Chr4: 396058-396557 Arabidopsis thaliana
AT4G00930 0.5kb downstream 0.5kb downstream 4677 true Chr4: 396558-401234 Arabidopsis thaliana
AT4G00930 0.5kb downstream 0.5kb downstream 500 false Chr4: 400735-401234 Arabidopsis thaliana
AT4G00930 1.0kb upstream 1.0kb upstream 5177 true Chr4: 395558-400734 Arabidopsis thaliana
AT4G00930 1.0kb upstream 1.0kb upstream 1000 false Chr4: 395558-396557 Arabidopsis thaliana
AT4G00930 1.0kb downstream 1.0kb downstream 5177 true Chr4: 396558-401734 Arabidopsis thaliana
AT4G00930 1.0kb downstream 1.0kb downstream 1000 false Chr4: 400735-401734 Arabidopsis thaliana
AT4G00930 2.0kb upstream 2.0kb upstream 6177 true Chr4: 394558-400734 Arabidopsis thaliana
AT4G00930 2.0kb upstream 2.0kb upstream 2000 false Chr4: 394558-396557 Arabidopsis thaliana
AT4G00930 2.0kb downstream 2.0kb downstream 6177 true Chr4: 396558-402734 Arabidopsis thaliana
AT4G00930 2.0kb downstream 2.0kb downstream 2000 false Chr4: 400735-402734 Arabidopsis thaliana
AT4G00930 5.0kb upstream 5.0kb upstream 9177 true Chr4: 391558-400734 Arabidopsis thaliana
AT4G00930 5.0kb upstream 5.0kb upstream 5000 false Chr4: 391558-396557 Arabidopsis thaliana
AT4G00930 5.0kb downstream 5.0kb downstream 9177 true Chr4: 396558-405734 Arabidopsis thaliana
AT4G00930 5.0kb downstream 5.0kb downstream 5000 false Chr4: 400735-405734 Arabidopsis thaliana
AT4G00930 10.0kb upstream 10.0kb upstream 14177 true Chr4: 386558-400734 Arabidopsis thaliana
AT4G00930 10.0kb upstream 10.0kb upstream 10000 false Chr4: 386558-396557 Arabidopsis thaliana
AT4G00930 10.0kb downstream 10.0kb downstream 14177 true Chr4: 396558-410734 Arabidopsis thaliana
AT4G00930 10.0kb downstream 10.0kb downstream 10000 false Chr4: 400735-410734 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377938 5261 Brassicaceae View MSA
123841102 5264 Brassicales-Malvales View MSA
124343739 5266 SBM View MSA
124248012 5268 Malvidae View MSA
124069381 5270 Rosid View MSA
123743976 5271 Pentapetalae View MSA
122793189 5272 Eudicot View MSA
122042859 5273 Angiosperm View MSA
121310036 5274 Embryophyte View MSA
123347639 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.437        
cufflinks 7.366        
cufflinks 3.757        
cufflinks 7.502        
cufflinks 3.404       Low
cufflinks 7.114        

0 Strain