Gene : AT4G00810 A. thaliana TAIR10
Defline:  (1 of 6) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  96
Name:  ? AT4G00810 Secondary Identifier:  ? PAC:19647511
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00810 0.5kb upstream 0.5kb upstream 1748 true Chr4: 345952-347699 Arabidopsis thaliana
AT4G00810 0.5kb upstream 0.5kb upstream 500 false Chr4: 347200-347699 Arabidopsis thaliana
AT4G00810 0.5kb downstream 0.5kb downstream 1748 true Chr4: 345452-347199 Arabidopsis thaliana
AT4G00810 0.5kb downstream 0.5kb downstream 500 false Chr4: 345452-345951 Arabidopsis thaliana
AT4G00810 1.0kb upstream 1.0kb upstream 2248 true Chr4: 345952-348199 Arabidopsis thaliana
AT4G00810 1.0kb upstream 1.0kb upstream 1000 false Chr4: 347200-348199 Arabidopsis thaliana
AT4G00810 1.0kb downstream 1.0kb downstream 2248 true Chr4: 344952-347199 Arabidopsis thaliana
AT4G00810 1.0kb downstream 1.0kb downstream 1000 false Chr4: 344952-345951 Arabidopsis thaliana
AT4G00810 2.0kb upstream 2.0kb upstream 3248 true Chr4: 345952-349199 Arabidopsis thaliana
AT4G00810 2.0kb upstream 2.0kb upstream 2000 false Chr4: 347200-349199 Arabidopsis thaliana
AT4G00810 2.0kb downstream 2.0kb downstream 3248 true Chr4: 343952-347199 Arabidopsis thaliana
AT4G00810 2.0kb downstream 2.0kb downstream 2000 false Chr4: 343952-345951 Arabidopsis thaliana
AT4G00810 5.0kb upstream 5.0kb upstream 6248 true Chr4: 345952-352199 Arabidopsis thaliana
AT4G00810 5.0kb upstream 5.0kb upstream 5000 false Chr4: 347200-352199 Arabidopsis thaliana
AT4G00810 5.0kb downstream 5.0kb downstream 6248 true Chr4: 340952-347199 Arabidopsis thaliana
AT4G00810 5.0kb downstream 5.0kb downstream 5000 false Chr4: 340952-345951 Arabidopsis thaliana
AT4G00810 10.0kb upstream 10.0kb upstream 11248 true Chr4: 345952-357199 Arabidopsis thaliana
AT4G00810 10.0kb upstream 10.0kb upstream 10000 false Chr4: 347200-357199 Arabidopsis thaliana
AT4G00810 10.0kb downstream 10.0kb downstream 11248 true Chr4: 335952-347199 Arabidopsis thaliana
AT4G00810 10.0kb downstream 10.0kb downstream 10000 false Chr4: 335952-345951 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369008 5261 Brassicaceae View MSA
123840228 5264 Brassicales-Malvales View MSA
124346847 5266 SBM View MSA
124250249 5268 Malvidae View MSA
124074239 5270 Rosid View MSA
123751356 5271 Pentapetalae View MSA
122787708 5272 Eudicot View MSA
122049908 5273 Angiosperm View MSA
121345630 5274 Embryophyte View MSA
123424644 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.134        
cufflinks 24.878        
cufflinks 29.544     High  
cufflinks 27.472        
cufflinks 21.744       Low
cufflinks 35.034     High High

0 Strain