Gene : ROPGEF3 A. thaliana TAIR10
Primary Identifier:  ? AT4G00460 Defline:  (1 of 14) PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE)
Genomic Order:  58 Name:  ? AT4G00460
Secondary Identifier:  ? PAC:19643926
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00460 0.5kb upstream 0.5kb upstream 3117 true Chr4: 211081-214197 Arabidopsis thaliana
AT4G00460 0.5kb upstream 0.5kb upstream 500 false Chr4: 213698-214197 Arabidopsis thaliana
AT4G00460 0.5kb downstream 0.5kb downstream 3117 true Chr4: 210581-213697 Arabidopsis thaliana
AT4G00460 0.5kb downstream 0.5kb downstream 500 false Chr4: 210581-211080 Arabidopsis thaliana
AT4G00460 1.0kb upstream 1.0kb upstream 3617 true Chr4: 211081-214697 Arabidopsis thaliana
AT4G00460 1.0kb upstream 1.0kb upstream 1000 false Chr4: 213698-214697 Arabidopsis thaliana
AT4G00460 1.0kb downstream 1.0kb downstream 3617 true Chr4: 210081-213697 Arabidopsis thaliana
AT4G00460 1.0kb downstream 1.0kb downstream 1000 false Chr4: 210081-211080 Arabidopsis thaliana
AT4G00460 2.0kb upstream 2.0kb upstream 4617 true Chr4: 211081-215697 Arabidopsis thaliana
AT4G00460 2.0kb upstream 2.0kb upstream 2000 false Chr4: 213698-215697 Arabidopsis thaliana
AT4G00460 2.0kb downstream 2.0kb downstream 4617 true Chr4: 209081-213697 Arabidopsis thaliana
AT4G00460 2.0kb downstream 2.0kb downstream 2000 false Chr4: 209081-211080 Arabidopsis thaliana
AT4G00460 5.0kb upstream 5.0kb upstream 7617 true Chr4: 211081-218697 Arabidopsis thaliana
AT4G00460 5.0kb upstream 5.0kb upstream 5000 false Chr4: 213698-218697 Arabidopsis thaliana
AT4G00460 5.0kb downstream 5.0kb downstream 7617 true Chr4: 206081-213697 Arabidopsis thaliana
AT4G00460 5.0kb downstream 5.0kb downstream 5000 false Chr4: 206081-211080 Arabidopsis thaliana
AT4G00460 10.0kb upstream 10.0kb upstream 12617 true Chr4: 211081-223697 Arabidopsis thaliana
AT4G00460 10.0kb upstream 10.0kb upstream 10000 false Chr4: 213698-223697 Arabidopsis thaliana
AT4G00460 10.0kb downstream 10.0kb downstream 12617 true Chr4: 201081-213697 Arabidopsis thaliana
AT4G00460 10.0kb downstream 10.0kb downstream 10000 false Chr4: 201081-211080 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028009 5273 Angiosperm View MSA
122379258 5261 Brassicaceae View MSA
123831563 5264 Brassicales-Malvales View MSA
124337312 5266 SBM View MSA
124253724 5268 Malvidae View MSA
124068566 5270 Rosid View MSA
123739003 5271 Pentapetalae View MSA
122789131 5272 Eudicot View MSA
121297565 5274 Embryophyte View MSA
123335608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.248     Low  
cufflinks 0.889        
cufflinks 0.198     Low  
cufflinks 0.888        
cufflinks 0.109     Low Low
cufflinks 1.297       High

0 Strain