Gene : AT4G00500 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21493:SF139 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  62
Name:  ? AT4G00500 Secondary Identifier:  ? PAC:19648884
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPAS-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00500 0.5kb upstream 0.5kb upstream 2869 true Chr4: 225028-227896 Arabidopsis thaliana
AT4G00500 0.5kb upstream 0.5kb upstream 500 false Chr4: 227397-227896 Arabidopsis thaliana
AT4G00500 0.5kb downstream 0.5kb downstream 2869 true Chr4: 224528-227396 Arabidopsis thaliana
AT4G00500 0.5kb downstream 0.5kb downstream 500 false Chr4: 224528-225027 Arabidopsis thaliana
AT4G00500 1.0kb upstream 1.0kb upstream 3369 true Chr4: 225028-228396 Arabidopsis thaliana
AT4G00500 1.0kb upstream 1.0kb upstream 1000 false Chr4: 227397-228396 Arabidopsis thaliana
AT4G00500 1.0kb downstream 1.0kb downstream 3369 true Chr4: 224028-227396 Arabidopsis thaliana
AT4G00500 1.0kb downstream 1.0kb downstream 1000 false Chr4: 224028-225027 Arabidopsis thaliana
AT4G00500 2.0kb upstream 2.0kb upstream 4369 true Chr4: 225028-229396 Arabidopsis thaliana
AT4G00500 2.0kb upstream 2.0kb upstream 2000 false Chr4: 227397-229396 Arabidopsis thaliana
AT4G00500 2.0kb downstream 2.0kb downstream 4369 true Chr4: 223028-227396 Arabidopsis thaliana
AT4G00500 2.0kb downstream 2.0kb downstream 2000 false Chr4: 223028-225027 Arabidopsis thaliana
AT4G00500 5.0kb upstream 5.0kb upstream 7369 true Chr4: 225028-232396 Arabidopsis thaliana
AT4G00500 5.0kb upstream 5.0kb upstream 5000 false Chr4: 227397-232396 Arabidopsis thaliana
AT4G00500 5.0kb downstream 5.0kb downstream 7369 true Chr4: 220028-227396 Arabidopsis thaliana
AT4G00500 5.0kb downstream 5.0kb downstream 5000 false Chr4: 220028-225027 Arabidopsis thaliana
AT4G00500 10.0kb upstream 10.0kb upstream 12369 true Chr4: 225028-237396 Arabidopsis thaliana
AT4G00500 10.0kb upstream 10.0kb upstream 10000 false Chr4: 227397-237396 Arabidopsis thaliana
AT4G00500 10.0kb downstream 10.0kb downstream 12369 true Chr4: 215028-227396 Arabidopsis thaliana
AT4G00500 10.0kb downstream 10.0kb downstream 10000 false Chr4: 215028-225027 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370355 5261 Brassicaceae View MSA
123835561 5264 Brassicales-Malvales View MSA
124341929 5266 SBM View MSA
124238239 5268 Malvidae View MSA
124071468 5270 Rosid View MSA
123749324 5271 Pentapetalae View MSA
122786389 5272 Eudicot View MSA
122044867 5273 Angiosperm View MSA
121350799 5274 Embryophyte View MSA
123381889 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.298        
cufflinks 5.279        
cufflinks 3.274       Low
cufflinks 6.252       High
cufflinks 3.907        
cufflinks 5.289        

0 Strain