Gene : AT4G03420 A. thaliana TAIR10
Defline:  (1 of 5) PTHR31343//PTHR31343:SF3 - FAMILY NOT NAMED // GB|AAD11584.1 Genomic Order:  397
Name:  ? AT4G03420 Secondary Identifier:  ? PAC:19648638
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G03420 0.5kb upstream 0.5kb upstream 2692 true Chr4: 1511339-1514030 Arabidopsis thaliana
AT4G03420 0.5kb upstream 0.5kb upstream 500 false Chr4: 1511339-1511838 Arabidopsis thaliana
AT4G03420 0.5kb downstream 0.5kb downstream 2692 true Chr4: 1511839-1514530 Arabidopsis thaliana
AT4G03420 0.5kb downstream 0.5kb downstream 500 false Chr4: 1514031-1514530 Arabidopsis thaliana
AT4G03420 1.0kb upstream 1.0kb upstream 3192 true Chr4: 1510839-1514030 Arabidopsis thaliana
AT4G03420 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1510839-1511838 Arabidopsis thaliana
AT4G03420 1.0kb downstream 1.0kb downstream 3192 true Chr4: 1511839-1515030 Arabidopsis thaliana
AT4G03420 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1514031-1515030 Arabidopsis thaliana
AT4G03420 2.0kb upstream 2.0kb upstream 4192 true Chr4: 1509839-1514030 Arabidopsis thaliana
AT4G03420 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1509839-1511838 Arabidopsis thaliana
AT4G03420 2.0kb downstream 2.0kb downstream 4192 true Chr4: 1511839-1516030 Arabidopsis thaliana
AT4G03420 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1514031-1516030 Arabidopsis thaliana
AT4G03420 5.0kb upstream 5.0kb upstream 7192 true Chr4: 1506839-1514030 Arabidopsis thaliana
AT4G03420 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1506839-1511838 Arabidopsis thaliana
AT4G03420 5.0kb downstream 5.0kb downstream 7192 true Chr4: 1511839-1519030 Arabidopsis thaliana
AT4G03420 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1514031-1519030 Arabidopsis thaliana
AT4G03420 10.0kb upstream 10.0kb upstream 12192 true Chr4: 1501839-1514030 Arabidopsis thaliana
AT4G03420 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1501839-1511838 Arabidopsis thaliana
AT4G03420 10.0kb downstream 10.0kb downstream 12192 true Chr4: 1511839-1524030 Arabidopsis thaliana
AT4G03420 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1514031-1524030 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373030 5261 Brassicaceae View MSA
123830004 5264 Brassicales-Malvales View MSA
124339451 5266 SBM View MSA
124251276 5268 Malvidae View MSA
124067567 5270 Rosid View MSA
123743761 5271 Pentapetalae View MSA
122791281 5272 Eudicot View MSA
122049858 5273 Angiosperm View MSA
121311619 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.104        
cufflinks 16.256        
cufflinks 19.046        
cufflinks 22.141        
cufflinks 31.641     High High
cufflinks 11.477       Low

0 Strain