Gene : AT7SL-1 A. thaliana TAIR10
Primary Identifier:  ? AT4G02970 Defline:  (1 of 16) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein
Genomic Order:  345 Name:  ? AT4G02970
Secondary Identifier:  ? PAC:19644741
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02970 0.5kb upstream 0.5kb upstream 2181 true Chr4: 1316999-1319179 Arabidopsis thaliana
AT4G02970 0.5kb upstream 0.5kb upstream 500 false Chr4: 1316999-1317498 Arabidopsis thaliana
AT4G02970 0.5kb downstream 0.5kb downstream 2181 true Chr4: 1317499-1319679 Arabidopsis thaliana
AT4G02970 0.5kb downstream 0.5kb downstream 500 false Chr4: 1319180-1319679 Arabidopsis thaliana
AT4G02970 1.0kb upstream 1.0kb upstream 2681 true Chr4: 1316499-1319179 Arabidopsis thaliana
AT4G02970 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1316499-1317498 Arabidopsis thaliana
AT4G02970 1.0kb downstream 1.0kb downstream 2681 true Chr4: 1317499-1320179 Arabidopsis thaliana
AT4G02970 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1319180-1320179 Arabidopsis thaliana
AT4G02970 2.0kb upstream 2.0kb upstream 3681 true Chr4: 1315499-1319179 Arabidopsis thaliana
AT4G02970 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1315499-1317498 Arabidopsis thaliana
AT4G02970 2.0kb downstream 2.0kb downstream 3681 true Chr4: 1317499-1321179 Arabidopsis thaliana
AT4G02970 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1319180-1321179 Arabidopsis thaliana
AT4G02970 5.0kb upstream 5.0kb upstream 6681 true Chr4: 1312499-1319179 Arabidopsis thaliana
AT4G02970 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1312499-1317498 Arabidopsis thaliana
AT4G02970 5.0kb downstream 5.0kb downstream 6681 true Chr4: 1317499-1324179 Arabidopsis thaliana
AT4G02970 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1319180-1324179 Arabidopsis thaliana
AT4G02970 10.0kb upstream 10.0kb upstream 11681 true Chr4: 1307499-1319179 Arabidopsis thaliana
AT4G02970 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1307499-1317498 Arabidopsis thaliana
AT4G02970 10.0kb downstream 10.0kb downstream 11681 true Chr4: 1317499-1329179 Arabidopsis thaliana
AT4G02970 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1319180-1329179 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027864 5273 Angiosperm View MSA
122371399 5261 Brassicaceae View MSA
123839418 5264 Brassicales-Malvales View MSA
124339085 5266 SBM View MSA
124249880 5268 Malvidae View MSA
124070157 5270 Rosid View MSA
123749493 5271 Pentapetalae View MSA
122795019 5272 Eudicot View MSA
121297453 5274 Embryophyte View MSA
123335510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.171     Low  
cufflinks 0.444       High
cufflinks 0.156     Low Low
cufflinks 0.44       High
cufflinks 0.172     Low  
cufflinks 0.358        

0 Strain