Gene : AT4G02990 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13068//PTHR13068:SF24 - CGI-12 PROTEIN-RELATED // MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR-LIKE PROTEIN BELAYA SMERT Genomic Order:  347
Name:  ? AT4G02990 Secondary Identifier:  ? PAC:19646902
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02990 0.5kb upstream 0.5kb upstream 2646 true Chr4: 1321359-1324004 Arabidopsis thaliana
AT4G02990 0.5kb upstream 0.5kb upstream 500 false Chr4: 1321359-1321858 Arabidopsis thaliana
AT4G02990 0.5kb downstream 0.5kb downstream 2646 true Chr4: 1321859-1324504 Arabidopsis thaliana
AT4G02990 0.5kb downstream 0.5kb downstream 500 false Chr4: 1324005-1324504 Arabidopsis thaliana
AT4G02990 1.0kb upstream 1.0kb upstream 3146 true Chr4: 1320859-1324004 Arabidopsis thaliana
AT4G02990 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1320859-1321858 Arabidopsis thaliana
AT4G02990 1.0kb downstream 1.0kb downstream 3146 true Chr4: 1321859-1325004 Arabidopsis thaliana
AT4G02990 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1324005-1325004 Arabidopsis thaliana
AT4G02990 2.0kb upstream 2.0kb upstream 4146 true Chr4: 1319859-1324004 Arabidopsis thaliana
AT4G02990 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1319859-1321858 Arabidopsis thaliana
AT4G02990 2.0kb downstream 2.0kb downstream 4146 true Chr4: 1321859-1326004 Arabidopsis thaliana
AT4G02990 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1324005-1326004 Arabidopsis thaliana
AT4G02990 5.0kb upstream 5.0kb upstream 7146 true Chr4: 1316859-1324004 Arabidopsis thaliana
AT4G02990 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1316859-1321858 Arabidopsis thaliana
AT4G02990 5.0kb downstream 5.0kb downstream 7146 true Chr4: 1321859-1329004 Arabidopsis thaliana
AT4G02990 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1324005-1329004 Arabidopsis thaliana
AT4G02990 10.0kb upstream 10.0kb upstream 12146 true Chr4: 1311859-1324004 Arabidopsis thaliana
AT4G02990 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1311859-1321858 Arabidopsis thaliana
AT4G02990 10.0kb downstream 10.0kb downstream 12146 true Chr4: 1321859-1334004 Arabidopsis thaliana
AT4G02990 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1324005-1334004 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040971 5273 Angiosperm View MSA
122374547 5261 Brassicaceae View MSA
123831541 5264 Brassicales-Malvales View MSA
124339709 5266 SBM View MSA
124241412 5268 Malvidae View MSA
124061802 5270 Rosid View MSA
123747028 5271 Pentapetalae View MSA
122792069 5272 Eudicot View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.53     High High
cufflinks 5.171        
cufflinks 27.925     High  
cufflinks 4.798        
cufflinks 18.948        
cufflinks 4.716        

0 Strain