Gene : AT4G02720 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Genomic Order:  318
Name:  ? AT4G02720 Secondary Identifier:  ? PAC:19648728
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02720 0.5kb upstream 0.5kb upstream 2064 true Chr4: 1204303-1206366 Arabidopsis thaliana
AT4G02720 0.5kb upstream 0.5kb upstream 500 false Chr4: 1205867-1206366 Arabidopsis thaliana
AT4G02720 0.5kb downstream 0.5kb downstream 2064 true Chr4: 1203803-1205866 Arabidopsis thaliana
AT4G02720 0.5kb downstream 0.5kb downstream 500 false Chr4: 1203803-1204302 Arabidopsis thaliana
AT4G02720 1.0kb upstream 1.0kb upstream 2564 true Chr4: 1204303-1206866 Arabidopsis thaliana
AT4G02720 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1205867-1206866 Arabidopsis thaliana
AT4G02720 1.0kb downstream 1.0kb downstream 2564 true Chr4: 1203303-1205866 Arabidopsis thaliana
AT4G02720 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1203303-1204302 Arabidopsis thaliana
AT4G02720 2.0kb upstream 2.0kb upstream 3564 true Chr4: 1204303-1207866 Arabidopsis thaliana
AT4G02720 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1205867-1207866 Arabidopsis thaliana
AT4G02720 2.0kb downstream 2.0kb downstream 3564 true Chr4: 1202303-1205866 Arabidopsis thaliana
AT4G02720 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1202303-1204302 Arabidopsis thaliana
AT4G02720 5.0kb upstream 5.0kb upstream 6564 true Chr4: 1204303-1210866 Arabidopsis thaliana
AT4G02720 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1205867-1210866 Arabidopsis thaliana
AT4G02720 5.0kb downstream 5.0kb downstream 6564 true Chr4: 1199303-1205866 Arabidopsis thaliana
AT4G02720 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1199303-1204302 Arabidopsis thaliana
AT4G02720 10.0kb upstream 10.0kb upstream 11564 true Chr4: 1204303-1215866 Arabidopsis thaliana
AT4G02720 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1205867-1215866 Arabidopsis thaliana
AT4G02720 10.0kb downstream 10.0kb downstream 11564 true Chr4: 1194303-1205866 Arabidopsis thaliana
AT4G02720 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1194303-1204302 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360964 5261 Brassicaceae View MSA
123828390 5264 Brassicales-Malvales View MSA
124345990 5266 SBM View MSA
124251042 5268 Malvidae View MSA
124063299 5270 Rosid View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.922        
cufflinks 28.386        
cufflinks 19.364       Low
cufflinks 33.579     High High
cufflinks 21.541        
cufflinks 33.29     High High

0 Strain