Gene : AT4G02550 A. thaliana TAIR10
Defline:  (1 of 14) PF12776 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) Genomic Order:  299
Name:  ? AT4G02550 Secondary Identifier:  ? PAC:19648121
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02550 0.5kb upstream 0.5kb upstream 2303 true Chr4: 1120421-1122723 Arabidopsis thaliana
AT4G02550 0.5kb upstream 0.5kb upstream 500 false Chr4: 1122224-1122723 Arabidopsis thaliana
AT4G02550 0.5kb downstream 0.5kb downstream 2303 true Chr4: 1119921-1122223 Arabidopsis thaliana
AT4G02550 0.5kb downstream 0.5kb downstream 500 false Chr4: 1119921-1120420 Arabidopsis thaliana
AT4G02550 1.0kb upstream 1.0kb upstream 2803 true Chr4: 1120421-1123223 Arabidopsis thaliana
AT4G02550 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1122224-1123223 Arabidopsis thaliana
AT4G02550 1.0kb downstream 1.0kb downstream 2803 true Chr4: 1119421-1122223 Arabidopsis thaliana
AT4G02550 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1119421-1120420 Arabidopsis thaliana
AT4G02550 2.0kb upstream 2.0kb upstream 3803 true Chr4: 1120421-1124223 Arabidopsis thaliana
AT4G02550 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1122224-1124223 Arabidopsis thaliana
AT4G02550 2.0kb downstream 2.0kb downstream 3803 true Chr4: 1118421-1122223 Arabidopsis thaliana
AT4G02550 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1118421-1120420 Arabidopsis thaliana
AT4G02550 5.0kb upstream 5.0kb upstream 6803 true Chr4: 1120421-1127223 Arabidopsis thaliana
AT4G02550 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1122224-1127223 Arabidopsis thaliana
AT4G02550 5.0kb downstream 5.0kb downstream 6803 true Chr4: 1115421-1122223 Arabidopsis thaliana
AT4G02550 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1115421-1120420 Arabidopsis thaliana
AT4G02550 10.0kb upstream 10.0kb upstream 11803 true Chr4: 1120421-1132223 Arabidopsis thaliana
AT4G02550 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1122224-1132223 Arabidopsis thaliana
AT4G02550 10.0kb downstream 10.0kb downstream 11803 true Chr4: 1110421-1122223 Arabidopsis thaliana
AT4G02550 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1110421-1120420 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366734 5261 Brassicaceae View MSA
123834502 5264 Brassicales-Malvales View MSA
124336914 5266 SBM View MSA
124237588 5268 Malvidae View MSA
124072916 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.484       High
cufflinks 2.313        
cufflinks 2.497        
cufflinks 2.591        
cufflinks 2.93        
cufflinks 2.002       Low

0 Strain